Gene PHATRDRAFT_41079 details

Gene Information

• Locus tag: PHATRDRAFT_41079
• ID: 7198871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: -
• Start bp: 300868
• End bp: 301599
• Gene Length: 732 bp
• Protein Length: 243 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002185085
• Protein GI: 219129835

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCC ACGCAAACTG GAACGCGTTC GCGGCCGTGC ATTTTGACGC CGCCCGGTAC 
ATTCCGTCAC CGGCTTACGG CGTAAACCGT TTCATGCTCG ACCGCATCGG CAGCGAAAAA 
GCCCGGGCTA CCACCATTGT CCAGTACCAA CCTAACTCGA AGTTCCCCGA GCACGAACAC 
ATCGGCGGAG AAGAATTCTT GGTACTACAA GGGACCTTCA AAGATCAGTT TGGGGAATTT 
CCGGCCGGCA CGTACGTCCG CAATCCCATC GGGAGCAAGC ACGCGCCCTG GGTCGATGAC 
GACGGTTGCA CCATCATGGT GAAACTCCTA CAAATGGCAG AGACTGGCGA AGGAACGACT 
TCACTGCACA TTAATACAGA AAAAGAGAAA TCGAATGGAA CGCACCACAA ATTTGGAACC 
GTCCTGGATC TTTACAAAAA CGCTAGCACT GGAGAGCGTG TGGAAATGTG TTGGTTGAAG 
GCACTTAGCT ACTTCCCGGA AGCCGTTGAT GCTCAGGGCG AAGAGCTTTT CGTAATAGCG 
GGAACTCTCT TACTGGGCGA CGAAGCCTTT GGGCCTTGTG GATGGCTGCG GATTCCCCCG 
ATTGGGGACG TCCGCAGAAG TACACTCCGA TCCGGTCCAG AGGGAGCTCA GGTATATCGC 
AAGACTGGTC ATCTCTCCCC GAGCGCTTTG GCCATGGAAA AGATTCAAAT CAGTGACGAC 
GAAACAAATT GA 

 

Protein sequence

MKIHANWNAF AAVHFDAARY IPSPAYGVNR FMLDRIGSEK ARATTIVQYQ PNSKFPEHEH 
IGGEEFLVLQ GTFKDQFGEF PAGTYVRNPI GSKHAPWVDD DGCTIMVKLL QMAETGEGTT 
SLHINTEKEK SNGTHHKFGT VLDLYKNAST GERVEMCWLK ALSYFPEAVD AQGEELFVIA 
GTLLLGDEAF GPCGWLRIPP IGDVRRSTLR SGPEGAQVYR KTGHLSPSAL AMEKIQISDD 
ETN