Gene PHATRDRAFT_41042 details

Gene Information

• Locus tag: PHATRDRAFT_41042
• ID: 7198853
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 208670
• End bp: 211831
• Gene Length: 3162 bp
• Protein Length: 885 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184990
• Protein GI: 219129637

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.718194
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAAC CGCTTTTTTT GGGAAAGGCA ACTCTCTTTG ACGTAACGAG AGTCCTGATG 
TGCACCGTTG CGGAAAAAAT TTGGGAAAGT TCTATCGAGG AACCCATTTC CGTGACAAAA 
GTCAAACTTT AAAAAAGGTT GTGACAACCG ACAAGAAGTT TCTTACTGTA AATAGCAAAT 
GAAACCATAT TACTTGTAGG TTAAACACAT GATGATCTTG CAAACAAACA TCACTCCTTT 
GCCTTTTCAA CGGAACTGCA ACTCCGCAGA ATGACACTGT CTCTCAAAGT GTTATTCTTT 
ACGGTAGTTA TACCTGACAA AACGTTGTCG GTGATCAACT CCTTTCGCGG AACGGAAACA 
GGCGTCCGTA CTGCGGACAA TTTTCTGTAT TTTACGACGA AATTGCGTCG ACGAACCGGT 
TTCTAATACC AAGTAAAAAG GAACCGGTCC CAAGGCATCC CTTCGTCCAG AAAAGACGTC 
TTTAACGGAG TGGATCGGGT AGCCTTTTCG AACAGTTCCG ACTCCGAAGT AACTCACCGC 
AGTGCGCTCG CGTCACGGAT CATTGAAGCT GAATTAAAGT CCGCTTTCAC GACATTGTCT 
TGCCTCGCTA TCTGACACTC CTAGCGCTTT CTTGGCGTCG CTGATCGGAC TCGTGTTGTT 
GACCGGCAAC AATCTAAGAA CGACACCATT TCGGACGGAG AAACGATCGC GGCGGACGCA 
CGTGCCATCG CGGAGGCGTT TGGTAAACTC GAAATTGCTC CCGAGCACGA GGGCATCGAC 
ACTGGATTTG TGACGGACGA CGTTGACGAA CCTGTCTATA CCACGGCAAC GGCTGCCACA 
ACGCTTCCCG ACGCGTTGCT GCAGCAAGTC GTTTCCGAAG ACGAGGAGGA AAACGATCGG 
TATATTCTGG ATCCGTTGGA TCTTGACAGG ACTTCGGCAC AACTAGAACC CGAAGACGAC 
TGGTTTACTC AAGACGAACT TGCTGCGGCA TTGCGAGGGT TGGACCCCAG TCAAGACTTG 
CTGTGTCCGC CGGATTCTTC CTGGCAAAGC GACGAGGCGA GCGACGAAGA CTTGCCCGAT 
CAGGATCAGG AACTCCCGGA AATCGATATA TTGGATCTGG CTTACGACGG TGATTTTCTG 
GCTTCCAACG GAGGCGAATT TTCTTTGGAC AAAAGTCTTT TCGAACCTCT ACAAGATCTC 
GATTACGGTT TTGATCACGG ATCGATCGAC AGCCCTAGGA ACTGTCATAC AAGCGAGGAA 
TCACTGATAC CTACGAGTGA CGTGGGGGCT CCTGATTGTA ACAAAAGCAA CGCGATCGAA 
CTTTTGGAGC AATTGGAATC TCTTACGCTC GACTATCATC AGGATACAGA ACGAGAGGAG 
AACTTTGAAG AAATAGACAA CAACGAAATA AGCTTGGAGC AAGAGTTGCC ACCGTGGCTA 
TTCTGTCAAC CTTGCAACTC CAATTCATCG GACCTTGAAG CACTGGAGCC ACTACTAACC 
GCATCAACTG AAAACTACGT CGAACGCAAT CGTTACGACG AACAAGCCCT GGATTCATTG 
CTGGATTTGC GCGGCTTAAC ATTGGAAGAC TACTCGGAAT ACTGCCTACC TCAGGGTGAT 
TTAGAACAAT TGGATACGGA GGAACCGACT AGAAAAATGC TACCCTCGCT TTCGGACAAC 
GCGACGTCGG TTACAACAGG TGTTGATATT CGACCTGATG TGCAAAGGTT GGCACAACCC 
ATTTTGCAGA CTTTTGATGC GATCTATGAA TCAGAACTCA GCAAAGCGGA AACGACCGGA 
ACAGTAGCGA AACAAAGCAC TGCTAAGCCA CCCCGGAGCG AACGACTCTG TTTAGGGCAC 
AAGGAACGGA TTCTTGGTTT GGATTTGTCT CCGTGCGGTC AGTACTTGGC GACAGCCAGT 
CAAGATTCAA CCGTTCGCGT ATGGTCAACC GACACGAACC AATTGCTCGC AACAGTGCCG 
CACAATTCGG CCTATGAATG TTTGAGAGTA GTCTGGGCTA GTCCACAATG GGCTGAAAAC 
AATATAGATC GTAACGGTTG TGCTTGCCCT TACTTGCTGG CGACGGGCGG TGCCGATGGA 
ATTGTTCGAT TATTTCGGAG TGAGAAGCCG ACCGAGTGGG TATTGTGTGC CACTTTGGAC 
CATGCGGAAA TGAATCATTT TGAGGGCGAA GAAGAGGCCG ATACACCTCA AGTATATGCA 
CTTCAATTCA TTGATCATTG GAAAGCTTTG CCGGGTTCAA AAGAATCTGA CACGAATTCG 
TTCCTCTTGA CATCATCGGA TGACCACGTT CATCTATGGG AAATTTGTTC TAAATCCGAG 
GGGAAAAAAG AAGAATCCGA CAATGACAGC GGCGAATCGG GGAATCTTCG GTTGCGTGAA 
GTCTTTAGTA TGCACTTTGG CGATATGCAT AATCAGGCCT ATGGCGTGCA AGTCGGGCAT 
GTTACAGCTG CCGGGCTCGA CATTGCGGAT GCCACGACCA GCCCTATCCC TATAAGTAGC 
GGTGGAGATT CAGGTGTTTT TGGCGGAGAT CGTAATCCGA GAGGCCTCGT GTACGTTTTT 
GATGCGCGGT ATTGTGAAGC GAACGGACTT CTGGGAGCCG CTCTATCGGA TGGAACCTTG 
CGCCTCGTCA ATGGACGTGG GGTATGTCTT TCGTTGTTGC AGCTACCCGG TCATCGCTCG 
CACTTAACTT CACTTGCTTG GGATCGAACG GGAGAATGTC TCGCAACTTG CGTAGCGACA 
GGGCATTTAA TTACATGGGG AGTCTCCGTT GATGAATACG CCAATCGTGT GCACGCCACC 
TGTCGTGCTG TGATGGAAGG TGGCCACGAC AAAGGTCGAC CTCTGTTTGG TACGGAATTT 
GTAGGGCGTG ATGGGGATGA GGAAGATGAT CTTTTGATTT CATGGGGTGT CGATGGGCGG 
CTTTGTTTGT GGGATTCTTT TTCCACTGAC GAAATAGATC GACCGCTAGC CGTGCTCTTA 
CACAAACCGG AATATCCTAT ATACGCAGTG GACTTAATGC AAGATGCTTT TATTGCGGTT 
GGCGGCGGCA CGGGGGATGG TGGAGGTTTT GTCGGCATTC CTGTTCATCT TTACAAATTT 
CCACCGAAAG AAAAGGCATC ACCAGACCCT CTCCAAGGAT AG 

 

Protein sequence

MVEPLFLGKA TLFDVTRVLM CTVAEKIWES SIEEPISVTK RFLGVADRTR VVDRQQSKND 
TISDGETIAA DARAIAEAFG KLEIAPEHEG IDTGFVTDDV DEPVYTTATA ATTLPDALLQ 
QVVSEDEEEN DRYILDPLDL DRTSAQLEPE DDWFTQDELA AALRGLDPSQ DLLCPPDSSW 
QSDEASDEDL PDQDQELPEI DILDLAYDGD FLASNGGEFS LDKSLFEPLQ DLDYGFDHGS 
IDSPRNCHTS EESLIPTSDV GAPDCNKSNA IELLEQLESL TLDYHQDTER EENFEEIDNN 
EISLEQELPP WLFCQPCNSN SSDLEALEPL LTASTENYVE RNRYDEQALD SLLDLRGLTL 
EDYSEYCLPQ GDLEQLDTEE PTRKMLPSLS DNATSVTTGV DIRPDVQRLA QPILQTFDAI 
YESELSKAET TGTVAKQSTA KPPRSERLCL GHKERILGLD LSPCGQYLAT ASQDSTVRVW 
STDTNQLLAT VPHNSAYECL RVVWASPQWA ENNIDRNGCA CPYLLATGGA DGIVRLFRSE 
KPTEWVLCAT LDHAEMNHFE GEEEADTPQV YALQFIDHWK ALPGSKESDT NSFLLTSSDD 
HVHLWEICSK SEGKKEESDN DSGESGNLRL REVFSMHFGD MHNQAYGVQV GHVTAAGLDI 
ADATTSPIPI SSGGDSGVFG GDRNPRGLVY VFDARYCEAN GLLGAALSDG TLRLVNGRGV 
CLSLLQLPGH RSHLTSLAWD RTGECLATCV ATGHLITWGV SVDEYANRVH ATCRAVMEGG 
HDKGRPLFGT EFVGRDGDEE DDLLISWGVD GRLCLWDSFS TDEIDRPLAV LLHKPEYPIY 
AVDLMQDAFI AVGGGTGDGG GFVGIPVHLY KFPPKEKASP DPLQG