Gene PHATRDRAFT_41026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41026 
Symbol 
ID7198935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand- 
Start bp172281 
End bp172922 
Gene Length642 bp 
Protein Length213 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185063 
Protein GI219129789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.549899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCTA CAATTGCGTT TAGCAAGTTT GCATCTGCAT CCTTCTTGGC GGTTTTGCTT 
TCTCCGGCGT CTCTTCCTTC GGAATTGTCA TCGAATGCCG CTCCACCTGT TCCGGTGCTT 
GAAGTTATTA AAGTATACGG TAGACTGGCT TCCGCATCTT GCTTTGGAAA GACAGCTCCG 
CCCGGATCTT CGTGTCAAGT CACGAGCGAT GAGATGAAAG ATAAGTTGGG GCTAACTGAT 
TCTTCAACAA TACTGAATCG AGATGAATTC GGAAAACGAT TGTCGTCTCT CAGTTTCCAG 
TGGCCGTTAA AGCCTTACGG AGTGGATAAA GGCCTCGAAA AGACGGTCAT GATGAACAAA 
GGAGCCGAAA CAAGCGTTTA TATGGAAGAG CTGGAAGTCA AGGGTCTGTA CGACCGACGC 
AACCCAACAG GTCCGCTGCC AACAAGCTTG AGGTCGAAAC TGAACGTACT ATTGCAAGAG 
GAGAATCTCG ATCCTAACGT CGTAAATATA TATTTCGCGG CTCTTTCGAC GAGAAAGGAG 
CTGACGGCGG CCGATATAGA TGCGCTATTT TTACGAAAAG CTGCTCTCGA CTATTACGAT 
TTTATCCAAC TTGTTGGTGC AAGCAATGTT GTCTGGCCTT GA
 
Protein sequence
MLSTIAFSKF ASASFLAVLL SPASLPSELS SNAAPPVPVL EVIKVYGRLA SASCFGKTAP 
PGSSCQVTSD EMKDKLGLTD SSTILNRDEF GKRLSSLSFQ WPLKPYGVDK GLEKTVMMNK 
GAETSVYMEE LEVKGLYDRR NPTGPLPTSL RSKLNVLLQE ENLDPNVVNI YFAALSTRKE 
LTAADIDALF LRKAALDYYD FIQLVGASNV VWP