Gene PHATRDRAFT_30960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30960 
Symbol 
ID7198961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp325823 
End bp326822 
Gene Length1000 bp 
Protein Length313 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185012 
Protein GI219129683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACG ATGAAATGAT TTGGTCGGTG ATCAATCATC AATTTTGTTC CTTTAAAACG 
ACAATTGGTA AGGCTTTGTC CGACAAGACT CATTTCTGTC GCCATCCGTA CTCGGTAACT
GGTTTATGCA ACCGTACATC GTGCCCATTG GCCAACAGCA AGTATGCGAC GATCCGGGAG
GAAAATGGAC GGATTCATCT ATACATGAAA ACAGTAGAAC GAGCACATTC TCCGAAGAAC
CTTTGGGAAA AAATTGTCTT GTCGCGCAAT TACGGCAAGG CATTGGCGCA GCTTGATGAG
CACTTGCAGT TTTTCCCAAA AGTGCTGATG CACAGAAACA AACAACGATT AACAAAAATT
CATCAGTATT TGATTCGAAT GCGAAAAATT GAGCTCAAGG TGAGGTCAGG TCGGAAAGCC
AAAATGGTGG GGGTCCATCG AAAGATCGAC CAACGAGAGG AGCGTCGAGA ACGCAAGGCT
TTGGTGGCTG CGAAGATTGA AAGAAATATA GAAAAGGAAT TGACGGAGCG TCTTGCTAAG
GGTACTTACG GCGATATATA TAACTTCCCG GAAACAAGCT ATCAAAAGGC GCTAGAAACC
GCTGAGGAAA ACGAAGAGGA AACGGAGGCT GAGTCAGAAG AAGAGGAAGA GGACGGTTTG
ATGGAGTATG TAGAAGACCT AGATTCAGAG GAAGAGGACG AAATAGAGGA TGACATGGAA
GATATTGACT ATTTGGGAGG CGGACAATGG GGACAGGCAT CCGATAGTGA TGATGGCGGT
GATTCGAAAG TTGACGACCA TGATCAGGAT ACTGATGACA ATTCCGAAGA CAATGATAGA
AAGCTGAAAA AGAAGGCAAG AAGGCGAGGA CCACGTGTTG AAATTGAATA CGAGGACGAG
CAGGAAGGGA ATGCTCCGAT GGCTGCCGAG ACGGCTTGGT AATTCACAGG GCCACAAACA
TCACTTTGTT GTTTATTCTA AACAATTCTA TATCTAGAGT
 
Protein sequence
MQHDEMIWSV INHQFCSFKT TIGKALSDKT HFCRHPYSVT GLCNRTSCPL ANSKYATIRE 
ENGRIHLYMK TVERAHSPKN LWEKIVLSRN YGKALAQLDE HLQFFPKVLM HRNKQRLTKI
HQYLIRMRKI ELKVRSGRKA KMVGVHRKID QREERRERKA LVAAKIERNI EKELTERLAK
GTYGDIYNFP ETSYQKALET AEENEEETEA ESEEEEEDGL MEYVEDLDSE EEDEIEDDME
DIDYLGGGQW GQASDSDDGG DSKVDDHDQD TDDNSEDNDR KLKKKARRRG PRVEIEYEDE
QEGNAPMAAE TAW