Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30960 |
Symbol | |
ID | 7198961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | + |
Start bp | 325823 |
End bp | 326822 |
Gene Length | 1000 bp |
Protein Length | 313 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185012 |
Protein GI | 219129683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCACG ATGAAATGAT TTGGTCGGTG ATCAATCATC AATTTTGTTC CTTTAAAACG ACAATTGGTA AGGCTTTGTC CGACAAGACT CATTTCTGTC GCCATCCGTA CTCGGTAACT GGTTTATGCA ACCGTACATC GTGCCCATTG GCCAACAGCA AGTATGCGAC GATCCGGGAG GAAAATGGAC GGATTCATCT ATACATGAAA ACAGTAGAAC GAGCACATTC TCCGAAGAAC CTTTGGGAAA AAATTGTCTT GTCGCGCAAT TACGGCAAGG CATTGGCGCA GCTTGATGAG CACTTGCAGT TTTTCCCAAA AGTGCTGATG CACAGAAACA AACAACGATT AACAAAAATT CATCAGTATT TGATTCGAAT GCGAAAAATT GAGCTCAAGG TGAGGTCAGG TCGGAAAGCC AAAATGGTGG GGGTCCATCG AAAGATCGAC CAACGAGAGG AGCGTCGAGA ACGCAAGGCT TTGGTGGCTG CGAAGATTGA AAGAAATATA GAAAAGGAAT TGACGGAGCG TCTTGCTAAG GGTACTTACG GCGATATATA TAACTTCCCG GAAACAAGCT ATCAAAAGGC GCTAGAAACC GCTGAGGAAA ACGAAGAGGA AACGGAGGCT GAGTCAGAAG AAGAGGAAGA GGACGGTTTG ATGGAGTATG TAGAAGACCT AGATTCAGAG GAAGAGGACG AAATAGAGGA TGACATGGAA GATATTGACT ATTTGGGAGG CGGACAATGG GGACAGGCAT CCGATAGTGA TGATGGCGGT GATTCGAAAG TTGACGACCA TGATCAGGAT ACTGATGACA ATTCCGAAGA CAATGATAGA AAGCTGAAAA AGAAGGCAAG AAGGCGAGGA CCACGTGTTG AAATTGAATA CGAGGACGAG CAGGAAGGGA ATGCTCCGAT GGCTGCCGAG ACGGCTTGGT AATTCACAGG GCCACAAACA TCACTTTGTT GTTTATTCTA AACAATTCTA TATCTAGAGT
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Protein sequence | MQHDEMIWSV INHQFCSFKT TIGKALSDKT HFCRHPYSVT GLCNRTSCPL ANSKYATIRE ENGRIHLYMK TVERAHSPKN LWEKIVLSRN YGKALAQLDE HLQFFPKVLM HRNKQRLTKI HQYLIRMRKI ELKVRSGRKA KMVGVHRKID QREERRERKA LVAAKIERNI EKELTERLAK GTYGDIYNFP ETSYQKALET AEENEEETEA ESEEEEEDGL MEYVEDLDSE EEDEIEDDME DIDYLGGGQW GQASDSDDGG DSKVDDHDQD TDDNSEDNDR KLKKKARRRG PRVEIEYEDE QEGNAPMAAE TAW
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