Gene PHATRDRAFT_23850 details

Gene Information

• Locus tag: PHATRDRAFT_23850
• Symbol: DHLTA_3
• ID: 7198880
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 369480
• End bp: 371695
• Gene Length: 2216 bp
• Protein Length: 477 aa
• GC content: 58%
• Product: dihydrolipoamide acetyl transferase
• Protein accession: XP_002185022
• Protein GI: 219129704

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0269849
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTTGATTCG ATCCGAGAAG CAGAATCCCT CTCGATAACT CGACCCACCT TTCGATCGTC 
GTTCGTCGTT GCAGTGGTAG TTGTTGTTCG TTCGTATATA CTTTCACAGT CAGTAAGGAA 
TGAAGTTTCA TACATCAGCC GCACTGTGGA TCGCGTTCGC GACGGCGTCC TCCGTAGACG 
CCTTTCGCGT CACATCCCGA CCCTCGGTCA CGCTCCGTCC TTGGCGTACC GCACTATGCG 
CTGAAGGCAC CAAAATCACC ATGCCCGCCT TGTCTTCCAC CATGAAAGAA GGCCGCGTCG 
TGTCTTGGCT CAAGAACGAA GGCGACGAAA TCGAAGCCGG CGAAGCCATC ATGGTCGTCG 
AGTCCGACAA GGCCGATATG GACGTCGAAG CCTTTGAAGA CGGAGTCCTC GCCAAAATAC 
TCGTACCGGA AGGAGCCATG GCTCCGGTCG GAGAAGCCGT CGCTCTCATG GCTGAAAACG 
CGGCCGATGT GGCCTCCGTC ATCGCCAGCT TGGGCGCCGG ATCCTCCGCC TCCGAGCCGG 
TCCTCGATGC ACCCGCACCA ACATCCGGTA CGTACGTTTG TTTGTTTGTT CACCATTGCA 
TCGCAACGAA CTTGCGTTCC GTCTACTCTA CGAACGATTT TATTTGAATC CGATTTACCC 
TTTATTCACC AACTGTCCGG TTCCATTACA GCATCGGCTG CCGCTCCCGA TTTTGAATTC 
AGTCAAATCG ATATGCCCGC CCTCTCGTCC ACCATGAAAG AGGGCAAGGT CGTGTCTTGG 
CTCAAGGCCG AAGGCGATCC TATTGCCGCC GGCGAAGCCA TCATGGTCGT CGAGTCCGAC 
AAGGCCGATA TGGACGTCGA AGCCTTCGAA GACGGCTTCC TGGCCGCCAT CATCACCGGA 
GAAGGGGAGA GTGGCGCCGT CGGTGCACCC GTCGCCTTAA TCGCCGTCGA AGAAGCCGAC 
ATTCCCGCCC TACAGACCTA CGCCGCGACC CTTTCCGGAG CGCCCGTCGC GTCTACTCCC 
GCTACGACGG CACCAGCTTC TCCCGCCACG GCCCCGGCCG CACCCCAGGC GGCGGCTCCC 
CGTCCCGCCG GAGAACGCGT CACGGCGTCG CCCCTGGCTC GCAAGAAGGC CCAGGAACTC 
GGCGTTGATC TCAACACCAT CACGGGAACC GGACCCAGTG GTCGCGTTAC CGCCTCGGAC 
ATTGAAGCCG CCGCCTCGGG TACCGCGCCT CCCCGGCCCT CCGCTGTCGC CCAGTCCTCC 
TGGACCCCCG CGGCGGGCGT CGTGGCCGCC ACGCCCACGG CACGCGCTTT GGCCAAAAAG 
GCGAAACTCG ACCTGGCCAC CGTTACTGGT ACCGGTGAAT TTGGTCGTGT GACCGCCCAC 
GACGTCAAAC TCGCCACCGG CGAAGCCAAA CCGATTCGCA AGAGTGCCGC GGCCAACGGC 
GCGCCCGCCG TTGAATTGCC CGAAGGCGTC GTCCCCATGA CGGGCATGCA ACGGGCAGTC 
AGCAACAACA TGGTGGCGAC CTTGCCGACC CCCGAATTCC GTGTCACTCG GGAAATCCAA 
ATGGACGCCT TTGACGCGCT CTACCAAAAA CTTAAACCCA ACGGCATCAC GGTCTCCGCC 
ATGTTGGCCA AAGCCGTCGC CTTGGCGATT GAAAAACATC CCATTATCAA TTCCAGCTTT 
TCCGAAGAAG GTGGTGGTAG TATTGTTTAC AAGAAAGACA TCAATATTGC CATGGCTGTC 
GCCATTGACG GTGGTCTAAT TACACCGGTT TTGCAGTATG CCAACGAACG CAGCGTCGTC 
GAGCTCGGAG AGAATTGGAA AGAATTGGTC GGCAAGGCCA AGAGTGGAAC CTTGGCACCG 
GCCGAATACA ATTCTGGAAC GTTTGCCATC TCCAACATGG GCATGTTTGG GGTCACGCAC 
TTTGGCGCCA TTCTACCCAA GGGCATTGGT GGTATCCTCG CCATTGGAGC CACCCAAGAA 
ATGATCGTTC CCGATCAGTC GGCCATTCTG GGAATGAAGA AGGTCAAGAA AATGTCGGTG 
ACCCTCACTT GTGATCACCG CCAAATTTAC GGAGCCGACG CTGCGCTCTT TCTCAAAACA 
CTGGCGGATA TTATGGAAAA TCAACTCGGC AAAATTACGG CGTGAGAACG GAGACCGCAC 
TCGGCTCCCA ACCAAAATTG CTAGTATCTA ATAGAAACAA AAACCCATCT TTGTCC 

 

Protein sequence

MKFHTSAALW IAFATASSVD AFRVTSRPSV TLRPWRTALC AEGTKITMPA LSSTMKEGRV 
VSWLKNEGDE IEAGEAIMVV ESDKADMDVE AFEDGVLAKI LVPEGAMAPV GEAVALMAEN 
AADVASVIAS LGAGSSASEP VLDAPAPTSG TYVSPVASTP ATTAPASPAT APAAPQAAAP 
RPAGERVTAS PLARKKAQEL GVDLNTITGT GPSGRVTASD IEAAASGTAP PRPSAVAHAA 
ANGAPAVELP EGVVPMTGMQ RAVSNNMVAT LPTPEFRVTR EIQMDAFDAL YQKLKPNGIT 
VSAMLAKAVA LAIEKHPIIN SSFSEEGGGS IVYKKDINIA MAVAIDGGLI TPVLQYANER 
SVVELGENWK ELVGKAKSGT LAPAEYNSGT FAISNMGMFG VTHFGAILPK GIGGILAIGA 
TQEMIVPDQS AILGMKKVKK MSVTLTCDHR QIYGADAALF LKTLADIMEN QLGKITA