Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50024 |
Symbol | |
ID | 7198723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 177638 |
End bp | 178769 |
Gene Length | 1132 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184836 |
Protein GI | 219129313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.17694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAAGTCCTT TTTCACGGAA GATCAAACGA GGCTGTCTAT CCAACCCTGT TTGCTGTTGG TTGTCCAAGC CCGTGCGTGC CCCAGACTCT GTCCACCATG ATCCATAGTC GGAGATCCTT CCGGCAGTAC ACGGACTGAT CAGATAGTGT CAACCCGTTT ACCTCGCTGG TAGCCCAGGA GTTTCACAGT TCCCTTTTGC CTTTCCGAAC GAACGAACCT ACACACACGA AGCAAACGCT CTTACAGCTA ATCATTGTCA ACCTTGGGCA CTCGAGAGTA CACTTTCAAA CACATACATA CACACACGTA TCTACATACA TCTTTAGAGA TCACGAAGTT CCTTGCGTCG TGTATTACGC AACACCAACA TGGGTCAATC CAGTTCGCAT CCCGCACAAA AGTCTCCTTC GGCAGCCTTC GGGCGACTCC GGATTGATTC ACCCCGTCCG GGTCGTCCCT CGCACCGTGG AAGTACCCTG AATACGGGCC GTACCGCATC ACTCCAAGGT ATGCCCGCCG CGTGGGAACG ATCGCCGTTG CTGGGACGAG AACTGGCGTC TGTACCCTCC GACGTGTCCT CCGCTAACGG ATCGCCACCG TTGGCACTCT GGATTGGACC GGCGCTCGTG TGTGCCTTGG CCTACGCACT CTACAACATC TTTATCAAGA AAGGCTCGGC GTCAATTCAT CCCGTCCTCG GCGGTGTCAT TTTACAGTTC GTCGCGGCCT TGTTGGGAAT CCTCCTACTG TCGGTCCTCG TGTGGCGAGA CGGTGGTACG GAAGACCTCC AGTACGATCT ACCCGGCGTT CAATGGGCCA TTTGTGCAGG TGTGGCCGTG GGATCGGCCG AGATTTTGTC CTTTATCGTT TCCGGTATGG GTGTACAAGC CATGCAGAGT ATACCTATTA TTATTGGTGG GTCGGTCTTG TTCGGGACCG TTTTGGGTTA TTCCGTTCTG CAGGAAATGC TGACCTACCG CGGATGGTTG GGTGTTGTGT TGATTGCGGC AGGGATTGCT CTAGTGGGGA CCGACCCGGG GGGTGCGGGA AGTGTGCATT GAGTGTGAGT GAGTGTGAAC GGTTTTAATA GGGAGGACCG ATTGACAAAT GTCGAGCTTG TGTGTTCCCA AT
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Protein sequence | MGQSSSHPAQ KSPSAAFGRL RIDSPRPGRP SHRGSTLNTG RTASLQGMPA AWERSPLLGR ELASVPSDVS SANGSPPLAL WIGPALVCAL AYALYNIFIK KGSASIHPVL GGVILQFVAA LLGILLLSVL VWRDGGTEDL QYDLPGVQWA ICAGVAVGSA EILSFIVSGM GVQAMQSIPI IIGGSVLFGT VLGYSVLQEM LTYRGWLGVV LIAAGIALVG TDPGGAGSVH
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