Gene PHATRDRAFT_50024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50024 
Symbol 
ID7198723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp177638 
End bp178769 
Gene Length1132 bp 
Protein Length230 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184836 
Protein GI219129313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.17694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAGTCCTT TTTCACGGAA GATCAAACGA GGCTGTCTAT CCAACCCTGT TTGCTGTTGG 
TTGTCCAAGC CCGTGCGTGC CCCAGACTCT GTCCACCATG ATCCATAGTC GGAGATCCTT
CCGGCAGTAC ACGGACTGAT CAGATAGTGT CAACCCGTTT ACCTCGCTGG TAGCCCAGGA
GTTTCACAGT TCCCTTTTGC CTTTCCGAAC GAACGAACCT ACACACACGA AGCAAACGCT
CTTACAGCTA ATCATTGTCA ACCTTGGGCA CTCGAGAGTA CACTTTCAAA CACATACATA
CACACACGTA TCTACATACA TCTTTAGAGA TCACGAAGTT CCTTGCGTCG TGTATTACGC
AACACCAACA TGGGTCAATC CAGTTCGCAT CCCGCACAAA AGTCTCCTTC GGCAGCCTTC
GGGCGACTCC GGATTGATTC ACCCCGTCCG GGTCGTCCCT CGCACCGTGG AAGTACCCTG
AATACGGGCC GTACCGCATC ACTCCAAGGT ATGCCCGCCG CGTGGGAACG ATCGCCGTTG
CTGGGACGAG AACTGGCGTC TGTACCCTCC GACGTGTCCT CCGCTAACGG ATCGCCACCG
TTGGCACTCT GGATTGGACC GGCGCTCGTG TGTGCCTTGG CCTACGCACT CTACAACATC
TTTATCAAGA AAGGCTCGGC GTCAATTCAT CCCGTCCTCG GCGGTGTCAT TTTACAGTTC
GTCGCGGCCT TGTTGGGAAT CCTCCTACTG TCGGTCCTCG TGTGGCGAGA CGGTGGTACG
GAAGACCTCC AGTACGATCT ACCCGGCGTT CAATGGGCCA TTTGTGCAGG TGTGGCCGTG
GGATCGGCCG AGATTTTGTC CTTTATCGTT TCCGGTATGG GTGTACAAGC CATGCAGAGT
ATACCTATTA TTATTGGTGG GTCGGTCTTG TTCGGGACCG TTTTGGGTTA TTCCGTTCTG
CAGGAAATGC TGACCTACCG CGGATGGTTG GGTGTTGTGT TGATTGCGGC AGGGATTGCT
CTAGTGGGGA CCGACCCGGG GGGTGCGGGA AGTGTGCATT GAGTGTGAGT GAGTGTGAAC
GGTTTTAATA GGGAGGACCG ATTGACAAAT GTCGAGCTTG TGTGTTCCCA AT
 
Protein sequence
MGQSSSHPAQ KSPSAAFGRL RIDSPRPGRP SHRGSTLNTG RTASLQGMPA AWERSPLLGR 
ELASVPSDVS SANGSPPLAL WIGPALVCAL AYALYNIFIK KGSASIHPVL GGVILQFVAA
LLGILLLSVL VWRDGGTEDL QYDLPGVQWA ICAGVAVGSA EILSFIVSGM GVQAMQSIPI
IIGGSVLFGT VLGYSVLQEM LTYRGWLGVV LIAAGIALVG TDPGGAGSVH