| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50005 |
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| Symbol | |
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| ID | 7198706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | + |
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| Start bp | 113776 |
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| End bp | 115174 |
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| Gene Length | 1399 bp |
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| Protein Length | 431 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184827 |
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| Protein GI | 219129294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00111854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCGTTGACG GTGAGTTCAG TTTGTGGCAA TCATCCATTG ATCTCTTTGA GCCATCACCT
TGACCCCTCT GAGAGACTCT CCGCATAGAA CAAACTGTAG AGTATGAACG CACCCCCACC
GTCTTTGCCG GTCCGAACCG TTTCCAAGGG GGACACGAAT ATTACTTCCA AAACCGGACC
CCAAAAATCT CAATCTACAT TTGGGCATCC CGACAAGCCT CTTCCGTTGC CAACCAAAGC
TTTCCCATGT CGTATTTTTT CTGACGGATC TTCTGCAGGT ATTTTTGTGG AACGCATCGG
CAACAAACCC ATGCCAATTA CTGCTTCGCG TTCCATTCCT TTGCCTTCTT GGTCCTTTCC
CGGGAGCAGT ACAACCACAA AATTGCGACG TAAACAAAAT TCCATATCGC CATCACGTCA
AGGAACTGTG ATACTACGGC GAACCGGCAA CAAAGATTCT GTTTTTTCCG ATTCACAGAG
CTGCCATGAT GTTCACCCCG AGAAAGTGGT AGACGTACAA TCCAACTTTT GCCACGGGAT
TTTACTGGAA AACCTTTCGT CTGTGGCGCG TGACCTAACT CAACCCGATA TCCAAACATC
CCAGGAAGAT AATGCGAGTA GAACAACCAC CCACACAGCC TCGACCTGGA AACAATCGAA
CGTCGCCGTA CCAGTGGAAG GTAACAGACT TTGCTCGTCT TCGCAGCCAC CCATTGCACC
AATACTCGAA AATCCTCAAA GAAATGGTGT ATGGTGTCCA ATGTCTGGTT GGGCCACTGA
AAAGACAAAG GCTGTCGCTA TAAAAAGGGC GGACGAACGT GACCGCGAAG TGTCGGACGC
CGTGTGCTTG GCAAATGCTC ACGTGAGTTC GGGTGACACA GAGCAGAATA CTCGGCAATA
TTTAAGTGTC GGAACGACCG TTGCTTCCGA CGTACCACGT ACCCCGCACT GCAGCTACTA
TTTGAATGCC CCACAGCCAC CCCCTTCTTT TTTCGAAGAG GTTTCCTCAA ATGCATCATC
CACACGTCCG CAATCACAAG ACCTACAGAA AGCAGCTCTG TCCATTTTTG CAAACGAAAG
TCCAACAGAA TATGAGGATA AGGAACGGGC CTCGCCAAAC ACTGCACAAA AACACCAAAA
GCCTGACAAA AAGAAATCGG GTTGGAAACG GTGGTTAGTG CTCCTATTGT TTCTGATGGG
CAGTGTGGGC GGTATTGCTG CAGGAGGAAA ATTGTCGGTA CACAACAGCG ATACTTTCGA
GAAGACTAGG AATTCGTCGG TTGTTCTCGA AAGCCCTGGT CGGTTGGAGA GGATACCAGA
CGCTACGCGG CATACTTTGG AAACAATAGC TCCGACAATG GTAGCAACGT CGAAAGGCCT
GGATACATCG AGTTTTTGA
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| Protein sequence | MNAPPPSLPV RTVSKGDTNI TSKTGPQKSQ STFGHPDKPL PLPTKAFPCR IFSDGSSAGI
FVERIGNKPM PITASRSIPL PSWSFPGSST TTKLRRKQNS ISPSRQGTVI LRRTGNKDSV
FSDSQSCHDV HPEKVVDVQS NFCHGILLEN LSSVARDLTQ PDIQTSQEDN ASRTTTHTAS
TWKQSNVAVP VEGNRLCSSS QPPIAPILEN PQRNGVWCPM SGWATEKTKA VAIKRADERD
REVSDAVCLA NAHVSSGDTE QNTRQYLSVG TTVASDVPRT PHCSYYLNAP QPPPSFFEEV
SSNASSTRPQ SQDLQKAALS IFANESPTEY EDKERASPNT AQKHQKPDKK KSGWKRWLVL
LLFLMGSVGG IAAGGKLSVH NSDTFEKTRN SSVVLESPGR LERIPDATRH TLETIAPTMV
ATSKGLDTSS F
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