Gene PHATRDRAFT_49996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49996 
Symbol 
ID7198781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp95097 
End bp95829 
Gene Length733 bp 
Protein Length178 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184887 
Protein GI219129419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACCATGGAA ACTCAAAAGC TAGTTATGTT ACAGTTAGTT AGCTATTGCC AAAGCATTTG 
AAACTAGGCC ATTACCCAGA CCTGTTTTTC TACACAGCTC TTGCCAGTGC GGATCAAAGG
CAGGCAGACA GGCAGGCAGG CTGTCTGTCT GTACTGGCTA GTCCGTCTCG TCCATCTGGT
TTGCACTGTC CTCGGAATGA CGAAAAGGAA AATTCCCCAA CACCGGACTT TTGGTGATCA
CTCTTTCTGG GACACCCACT GCCAATCCTA CCCTGTCTTC CGTCGACGCG ACGCCGTCCC
TGACCCCGTC CGCCTCTCGT CGGACTCCGC GATTGGAGTT ACAGACTCCG TCGTCGCCAA
TACGGTCCCC GTCAATCCGT ACCGCCGAAT CCGTCCCGAA TCAATCCCTG CTCAACGGCG
TGCCGGCGAT GGATCATCCG ACTCCTGTAC CTCACGAGAG CACCGCCGAG AGCCAAGCCA
AAACAAAACA CAGGCCGTGA ATGCGCGTCT CTCGAAGGCC TCATTATCAC GGACCGGAAG
GAGCGCTCCG ACCAGTATAC CGCCAAGTGC GGAAAGCAGA GACACCGGAA TGAAAAAGCC
TTTCCCCGGC ACTGCCTACC CGTCGGAGCA ATCATCACCA ACGCAGAGTG TACAAGCCCT
TTTCGTCCAT TCTGAATCCA TCCCAAGCAA TTCTTCGCCA CGCCTCCTCC ACTCCAACGG
ACCCCAATAT TGA
 
Protein sequence
MTKRKIPQHR TFGDHSFWDT HCQSYPVFRR RDAVPDPVRL SSDSAIGVTD SVVANTVPVN 
PYRRIRPESI PAQRRAGDGS SDSCTSREHR REPSQNKTQA VNARLSKASL SRTGRSAPTS
IPPSAESRDT GMKKPFPGTA YPSEQSSPTQ SVQALFVHSE SIPSNSSPRL LHSNGPQY