Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49996 |
Symbol | |
ID | 7198781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 95097 |
End bp | 95829 |
Gene Length | 733 bp |
Protein Length | 178 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184887 |
Protein GI | 219129419 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TACCATGGAA ACTCAAAAGC TAGTTATGTT ACAGTTAGTT AGCTATTGCC AAAGCATTTG AAACTAGGCC ATTACCCAGA CCTGTTTTTC TACACAGCTC TTGCCAGTGC GGATCAAAGG CAGGCAGACA GGCAGGCAGG CTGTCTGTCT GTACTGGCTA GTCCGTCTCG TCCATCTGGT TTGCACTGTC CTCGGAATGA CGAAAAGGAA AATTCCCCAA CACCGGACTT TTGGTGATCA CTCTTTCTGG GACACCCACT GCCAATCCTA CCCTGTCTTC CGTCGACGCG ACGCCGTCCC TGACCCCGTC CGCCTCTCGT CGGACTCCGC GATTGGAGTT ACAGACTCCG TCGTCGCCAA TACGGTCCCC GTCAATCCGT ACCGCCGAAT CCGTCCCGAA TCAATCCCTG CTCAACGGCG TGCCGGCGAT GGATCATCCG ACTCCTGTAC CTCACGAGAG CACCGCCGAG AGCCAAGCCA AAACAAAACA CAGGCCGTGA ATGCGCGTCT CTCGAAGGCC TCATTATCAC GGACCGGAAG GAGCGCTCCG ACCAGTATAC CGCCAAGTGC GGAAAGCAGA GACACCGGAA TGAAAAAGCC TTTCCCCGGC ACTGCCTACC CGTCGGAGCA ATCATCACCA ACGCAGAGTG TACAAGCCCT TTTCGTCCAT TCTGAATCCA TCCCAAGCAA TTCTTCGCCA CGCCTCCTCC ACTCCAACGG ACCCCAATAT TGA
|
Protein sequence | MTKRKIPQHR TFGDHSFWDT HCQSYPVFRR RDAVPDPVRL SSDSAIGVTD SVVANTVPVN PYRRIRPESI PAQRRAGDGS SDSCTSREHR REPSQNKTQA VNARLSKASL SRTGRSAPTS IPPSAESRDT GMKKPFPGTA YPSEQSSPTQ SVQALFVHSE SIPSNSSPRL LHSNGPQY
|
| |