Gene PHATRDRAFT_49987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49987 
Symbol 
ID7198771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp42578 
End bp43561 
Gene Length984 bp 
Protein Length284 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184816 
Protein GI219129271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.418354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCTTTGAGA GTCCAGTCCA CATCACATGA GGAGCGATCT CGTTTCCATT TCTCGTTTGT 
GTGTTTTCAA GAACGTACTG AAAAGTTCCC ACCTTGGCGT AAAGCCCAAA ATTAGTTCTT
TGTATCGCTA TGAGGACGTT TTCCTGTTTG CTACTGGCAG TAGCTTGCAC CATCAGCCAG
TCTATTCAAG CTTCCATTAT TCCATCCTTC AGCCGTACAT CGACTTCGAT TACCCGCCGT
TCCAAGCGCC TGACGACGTC TACCCTGGCA TTTGTGGATG GAAATCACGT CCGTGGGGGA
TCGACGAAAA CCATCAAATC GTGTGCTGAT GCTGATTGGA AGCTGGCTTT GAAAGCAGGA
GTGGCGACGG CACTGGAAAC CATCGGATTG GTTGGAGTGA TTGCTGGTAC CAAAACGCTC
GCTTCCCGTT TTTCGGTTCC ATTCCTGACC AAGATGGTCG GCGGGCTTCC TATTGTACAG
TGGACTTCTC TTGGAATTGT TATTTTCGGG TCCAGTGCTG TAAAGAGTGT GACTGACGGC
GGAGTATCAG TAGCTAGTGC TCAAGTCTTC AGGCCAAACG TTACCCCCGG CGATCCAAAT
TGGTATTCAA ATCTTAAGAA ACCTTGGTTT AACCCACCGG CTTGGGTTTT TCCTGTTATG
TGGCTGATTG TGGCGAAACC GACGCAGCTC TGGGCGGTCT CAAGAGTCCT CAAAAGGACT
TCGACGATCC CTTACTGGCC TACGCTGAGC GTCTACTGTG CACACTTATC ATTGGGAGAT
ACGTGGAATC AGATTTTTTT TGGATGTCAA CGCATTCGGC TAGGTTCAGG AGTGATAACC
GCCTTTTGGG GAATGTTGGC CTTTAGCTCC AAGCTCTTTG CCAACATTGA CCCCACTGCA
GGCTATCTTT TGCTCCCTAC ATTGGCCTGG GTCACGGTGG CTTCTTCCCT GAATTTTGCC
ATTGATCGCT TAAACGTGGA CTAG
 
Protein sequence
MRTFSCLLLA VACTISQSIQ ASIIPSFSRT STSITRRSKR LTTSTLAFVD GNHVRGGSTK 
TIKSCADADW KLALKAGVAT ALETIGLVGV IAGTKTLASR FSVPFLTKMV GGLPIVQWTS
LGIVIFGSSA VKSVTDGGVS VASAQVFRPN VTPGDPNWYS NLKKPWFNPP AWVFPVMWLI
VAKPTQLWAV SRVLKRTSTI PYWPTLSVYC AHLSLGDTWN QIFFGCQRIR LGSGVITAFW
GMLAFSSKLF ANIDPTAGYL LLPTLAWVTV ASSLNFAIDR LNVD