Gene PHATRDRAFT_49986 details

Gene Information

• Locus tag: PHATRDRAFT_49986
• ID: 7198695
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 40445
• End bp: 42497
• Gene Length: 2053 bp
• Protein Length: 538 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184815
• Protein GI: 219129269

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCGACTCCAC GGTTCATTCT AATTCGTTTT TTAGGTCCTC GAAGAGTGTG GCTGCAAACT 
TTGATCATGA TCTTTCCCAA TACTCGGCAA CTCACGGAAC AGCAGAAAAA CATCCGGACG 
TACCAACCTC TTCATGTCGC GAAGGAGGAG CTTGCCTTAC TGAAGGACCA GGCCTTAATG 
GTGTCTCTTG CCAAAGAGCA TAGTTTTGCT GCTGCACGAT CTGTCTACGA AAAAGGAGCG 
CACTGTCAAC CTTTCGCTAC CTTGTCGCTG ACAAATTCGA CCAGAGTTCG CATTCAAGAA 
TTCACACACG TGTCCGGTAC GACCATGCAA GGTGATCAAG TCTCAGGATT TACCCGCAAC 
TCCTACAAAA TAGGGACAAC TAAGATACAA GTGCTGTATG ATGAAGACCA GTTGGTTCCT 
GCCACTTGCG AGTTTGGGGG AAATCCCGAG CCTGTTTTGG ACGGCTGTTT GGAAGGTACG 
GGTGAACTCG TTTTGGCTGA CGAGCAGGGA ACTACACTCC GTTACGTGTA CAATCCTAAC 
GCCGATAATG CCTACGGTCG GACTATTCAG GGCTTGAGTT TACACGCGGA CCGGCGCTTT 
CGAATGTCCC AACATGCCCC CGTTCCAGCT TCCCTGTCGC CGCCGATCGA ATACTACGGT 
CAAGCGTCGT ATGCGGATGA AATACTACAA ATTTTGCTCC TCTCATCCTC AACAGCTGGA 
GCTTCAAATT CGACCAATTT TCGCCGAGGT AACTTGGATT TTAGTTCGAT TGTCAGCAGT 
GACGCGCGAG CGGCCGCAAT TGCCTCAGCG ACTGGGCTGC TCACCTTGGG ACACTACCTT 
GTGCGTGATT TAGAAATGGC TGTATACCAA TGTCTGATAG AGGATTCCGA CCGCGCTCTG 
TTAGCATTGG ATCAGGCCGT AGTCCTCTAC GGAGCGAATC CTAATAGCCC TGAACACCTT 
ACGGCCCATT TGGCGGATCA GCAATGCCCA TCATTTCGTA CCTGTGCAGG AAAACGCGGG 
GTAGTCGGCC AATCCAGGGT CAATAGCGAT ATTCTTGAAA CGATTCTACC AGCGCTCCAA 
TCCGGTTTGG CTGCTCACCA GTGCAGCGTG GCGCGACGTG AAAAGGAACG TTTGACGGGA 
ATAATCAAGG TTCCGCTGGT CCAGGCTGTA CTGCAGTCCG CCTATCAAAT GAGCTACCAG 
CCCGACAGCG CACAGGTCCA CGCAGCACAA GCAGCAGTGT ATGTTGCTGC GCTGGTACCG 
TTTTTAGATG AGTGTCAACC GCTAGATGCT ACGATATTGT ACGACAGCTT GAAGGTCGGA 
CACGACACGT TCTCGTTTAG CCAAGTCAAG CAAGCACTAG AGAGAAACTA CGGGTGTTTG 
AAAGTATCAT GTTCACATGT TGGTGGATTG TGGAATAGCG AGAGCAAAAC ATATTTTGCG 
GGAGCTGAAC CCTGCATTGA TCCTGTAAAT GGCGAAGCCG AGGAAGACGG ACGCGCCCAA 
AAGAGCTGGT CCATAATGCT GGGACTCGTG ACCTTGTTTA TCTTGGGTTT CATCTGGCAA 
ATACACCGTC GACGTCGGCG GCAAAGCGAG CGACATACCC GACAGAGGAA ATCGTCTAAT 
CCAGAGTACT ACGACGACAG CGATTCCGAT TTTAGTGATA GCGCCGATGG TCGATTTGCT 
TGACCAAGAA CATACCTGTA AATTTATTGG TATGCTCAAA ATTATACGGA AGAATTTCAA 
ATGGATTTGG AGAGACAGAT ATCTACACGT ACATGGCATC TTTTGCATTC GCATGCATTG 
GAACTTGAGC CGGTGAGTCT TTTGTAAATC GTATCATAGG GCTATCATGC ACGTCTTGAC 
ATCAATGACA TTGATTGTTG ACTGTTACAG TAAACGAATC CTCTCTAGAA AGAGACAGAC 
TGCGAAGCTC TACGAGGGTC GCAAGAAAAT CTTTTAGTTA ATGTATGTGC TCACGTGATC 
CTCGTGTTGG TCACGAGACA AATTGCTTCA CTGTCCATAA GTTTTGAATA GTGTAACATA 
AGTATGTTGG TGT 

 

Protein sequence

MIFPNTRQLT EQQKNIRTYQ PLHVAKEELA LLKDQALMVS LAKEHSFAAA RSVYEKGAHC 
QPFATLSLTN STRVRIQEFT HVSGTTMQGD QVSGFTRNSY KIGTTKIQVL YDEDQLVPAT 
CEFGGNPEPV LDGCLEGTGE LVLADEQGTT LRYVYNPNAD NAYGRTIQGL SLHADRRFRM 
SQHAPVPASL SPPIEYYGQA SYADEILQIL LLSSSTAGAS NSTNFRRGNL DFSSIVSSDA 
RAAAIASATG LLTLGHYLVR DLEMAVYQCL IEDSDRALLA LDQAVVLYGA NPNSPEHLTA 
HLADQQCPSF RTCAGKRGVV GQSRVNSDIL ETILPALQSG LAAHQCSVAR REKERLTGII 
KVPLVQAVLQ SAYQMSYQPD SAQVHAAQAA VYVAALVPFL DECQPLDATI LYDSLKVGHD 
TFSFSQVKQA LERNYGCLKV SCSHVGGLWN SESKTYFAGA EPCIDPVNGE AEEDGRAQKS 
WSIMLGLVTL FILGFIWQIH RRRRRQSERH TRQRKSSNPE YYDDSDSDFS DSADGRFA