Gene PHATRDRAFT_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4342 
Symbol 
ID7198709 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp124626 
End bp125795 
Gene Length1170 bp 
Protein Length310 aa 
Translation table 
GC content60% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184829 
Protein GI219129299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGATTGGG AAGAATGGGA CGGACGTCAT CCCTTTTGGA TTCACTGTTT GGCGGGGAGT 
GTTGCCGGAG TCGTGGAACA CACCGCCGTG TATCCGCTCG ATACGGTCCG TACGCACATT
CAAGTGTGTG CCAGTTGTGC CGTCCGACGA AACCAACCAA ACACTGCGAC GGTCTCGTCG
CTGTTCCAGT CGACGACACG GAATCGGTCA GGATTGGCGG CCAAAGGGGC CGCCAACGCA
CTCCGATCAA CCGCAACAAC AACATCCACA CCACCACCAC TGCAACCCGC TCTGCCAACC
GGCATGTGGC AAACCATTCG TTACCTGGTC AATCAACCCA CTGTCGCGAC GGCCGCATGG
AACAGTACTA CCACCACCGC CGCCACTACC ACGGCAACCG CATCCTCCAC CGAGTTCGCC
AACACCAACG CGCCTTTGGC CCTGTTCCGA CTCTGGCGGG GCGTGCAGAC GATACTCGTG
GGATGCGTGC CAGCCCACGC CCTCTACTTT TCCAGTTACG AATTCGTCAA GGCCGCCACC
AGGGATGCCG ACGGACAGGT CACCACCTGG GGCAGCAGTC TCGCGGGAGC CGCCGCCACA
ACCTCGCACG ATCTCATCAT GACACCGCTC GACACGCTCA AACAACGACT CCAACTAGGA
CACTACGAAC GAGGCATGAT GCAGGGACTC ACACACATAC TGGCCACCGA AGGACCCGCC
GCACTCGTTC GATCATTCCC GATTACACTC GCCACCAACA TTCCCTACGG AATGGTCATG
GTTGGTACGC ACGAGTACGC CAAGGAACAC TTGTTCGCCG AATTGCCCTC TTCCTGGCAG
ACCATTCTGG CCAGTTCCAG TATTGCCGGA TTCGCTGCCG CCGCCATTAC CACACCTCTC
GATCGCATTA AAACGGCGCT GCAAACCCAA ACACTCGCCC CGGCCTGTCT CTATTTGCAA
CAACCGCCAC CGGCCGGGTC CACGCCGGGA CCCACCACGT GCCCTGCCGC CGTCCGCCCC
GTCTACACCA CTTGGCGTGA TGCCGCTGGA TACATTCTTC GTCACGAAGG ACCGGCCGGA
TTCTTTCGAG GCGTCGCACC ACGCATACTG TCCCACGTAC CCGCCGTGGC CATTTCCTGG
ACCACGTACG AAACCGCCAA GGCCTATCTG
 
Protein sequence
EDWEEWDGRH PFWIHCLAGS VAGVVEHTAV YPLDTVRTHI QVTTTTAATT TATASSTEFA 
NTNAPLALFR LWRGVQTILV GCVPAHALYF SSYEFVKAAT RDADGQVTTW GSSLAGAAAT
TSHDLIMTPL DTLKQRLQLG HYERGMMQGL THILATEGPA ALVRSFPITL ATNIPYGMVM
VGTHEYAKEH LFAELPSSWQ TILASSSIAG FAAAAITTPL DRIKTALQTQ TLAPACLYLQ
QPPPAGSTPG PTTCPAAVRP VYTTWRDAAG YILRHEGPAG FFRGVAPRIL SHVPAVAISW
TTYETAKAYL