Gene PHATRDRAFT_40962 details

Gene Information

• Locus tag: PHATRDRAFT_40962
• ID: 7198689
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 429766
• End bp: 431815
• Gene Length: 2050 bp
• Protein Length: 648 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002184875
• Protein GI: 219129394

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGAAG GGGATTCCCG CCGAAAGATT GGTGCTCAGG TGACAGCGAA GGCCTGTCAT 
GTTGTCCATT TGAGTGAGTG TGCTCGGCGA TACGGTGCTT TGAGGACCAC CAAGGTCGTT 
GTGGGGACTG TTGTGGAGGT CAACAATACC AGAAAGGCGC CAAACAACCG TGTATCAACC 
TTCATTACTG CTGACTTTGA TATTGGTGGA GGATCAGTCA AGCGGAGCAC TCTGAACATC 
CGTAGCGTCA AACTTTTCAA ACCGGACCAG TCGACAGTAC CAGCCAGTCC CGCAGCACCA 
ATACCGGCAG TAGACAACGC AGACACAGAT TTGGCCGTTC CAGAGCAAGA GGAAGGAGAA 
GCGGTCTTGC AGGAGACTTC TCCTGATGAA GAATTGGAAT TTCCAGCACA ACCGATGATG 
AAAATTGGAA TAGCTGCGGG GGAACAGGTA GCAGGACCTA CCGCACAAGT AGCCACGCAG 
GTTTGGGGTG TTGAAGACGC TTCCTTTGTA ATGGCTCATG AAACAAAGTG GTATGCTGAC 
GAGCAAGCTA CATTGATTGA TATAAATGGC AGTGTCCAAA GTAAGCAGTT TGGCATCAAT 
ACACCAATTG GCGACCTTCT TGGTCCAGAC TCTGACATTG ATGGAAAATA TTCGCGGCTG 
CAATTTTTTC TTCTCATGTT TCCACCCGAC CAACTGAGCG CCATGTGTCA GCTAACAAAT 
GTGCAGCTTG CCCAACAGAA CAAGCACTGC ATGTCAACAG GAGAGCTGCT TTGATTCTTT 
GGCATTCTAA TTCTTGCGAC AAAATTTGAA TTTAGCAGTC GATCGCAATT GTGGTCCACA 
ACCGCGCCGT CAAAATACAT TCCTGCCCCT GCATTCGGAA AAACAGGAAT GTCGCGGCAG 
CGCTTTGATG ATCTTTGGCG AAATATCCGA TGGAGCAACC AGTGTCCTGA ACGGCCGGAA 
GGTATGAGCT CCCATACGTT TCGGTGGCAA CTTGTCGATG ATTTTGTTGA AAGATACAAC 
AATCATCGAG CCAATACTTT CAAACCATCT CATCTTATTT GTGTGGATGA ATCAATGTCG 
CGATGGTATG GACAAGGGGG GGAATGGATA AATCATGGAC TCCCCAATTA TGTGGCTATT 
GACCGAAAGC CCGAAAACGG TTGTGAGATT CAAAATGCCG CATGCGGCTG TTCGGGTATC 
ATGCTTCGAT TGAAGGTTGT AAAGGGTAAG ACAGCAACAG AAAATGATGG GGACTACAAT 
GAACAGTTGC TGCATGGAAC AAAGATCCTC AAAGAGCTTG TCCTTCCTTG GTGGTGGACG 
GATCGGATTG TTTGCGCTGA CTCGTATTTT TCATCTGTCG GTACAGCTAT GGAGTTGCAG 
CGACATGGTT TGAGATTTAT TGGAGTTGTA AAAACAGCAA CAAAACAATA TCCGATGAGA 
TACCTTTCGA CTTTAGAGTT GAACCAGAGA GGCGAACGGA GAGGGCTTGT GATGCGAGAT 
GTTGATACAA ATTATAGCAC TCTGTTGGCT TTTGTGTGGA TGGACAGGGA CCGCCGATAT 
TTTGTGTCGA GTGCTTCCAG TCTGGATGCA GGCAAGCCCT ACGTACGCTA TCGTTGGAGA 
CAGATTGACC AATCTCCGGA TGCAGATCCA GAGAGGCTGG AAATTATCAT TCCACAGCCC 
AAAGCAGCGG AATTATACTA TTCTGCATGT GGGATGATTG ACAGGCACAA TCGAAGTCGT 
CAGGATACAC TGATGCTTGA ACGAAAGTTG GGTACAACAA ATTGGTCGAC AAGGGTTAAC 
CTCTCAATAT TTGGAATGAT TGTTGTTGAC ACTTGGTTGG CCTACAGTCT GTGTACAGGA 
ATAGGAAGAG CTAACGGGAG AGAAGAAAAG CAGAAAGACT TCTACACTGC CTTGGCTGAG 
GAGCTAGTGG ATAACCAATA CGACAATGTT GGAAGTCGCA GAGTTTTCGT GGAGACAAAT 
TTGGACAATG ACAGCCCAGC ACTTTCAAGG ACTACAGGAG AACCAAGAAG TGGCCTGTAC 
GCACATCTAA 

 

Protein sequence

MSEGDSRRKI GAQVTAKACH VVHLSECARR YGALRTTKVV VGTVVEVNNT RKAPNNRVST 
FITADFDIGG GSVKRSTLNI RSVKLFKPDQ STVPASPAAP IPAVDNADTD LAVPEQEEGE 
AVLQETSPDE ELEFPAQPMM KIGIAAGEQV AGPTAQVATQ VWGVEDASFV MAHETKWYAD 
EQATLIDING SVQSKQFGIN TPIGDLLGPD SDIDGKYSRL QFFLLMFPPD QLSAMCQLTN 
VQLAQQNKHC ISRSQLWSTT APSKYIPAPA FGKTGMSRQR FDDLWRNIRW SNQCPERPEG 
MSSHTFRWQL VDDFVERYNN HRANTFKPSH LICVDESMSR WYGQGGEWIN HGLPNYVAID 
RKPENGCEIQ NAACGCSGIM LRLKVVKGKT ATENDGDYNE QLLHGTKILK ELVLPWWWTD 
RIVCADSYFS SVGTAMELQR HGLRFIGVVK TATKQYPMRY LSTLELNQRG ERRGLVMRDV 
DTNYSTLLAF VWMDRDRRYF VSSASSLDAG KPYVRYRWRQ IDQSPDADPE RLEIIIPQPK 
AAELYYSACG MIDRHNRSRQ DTLMLERKLG TTNWSTRVNL SIFGMIVVDT WLAYSLCTGI 
GRANGREEKQ KDFYTALAEE LVDNQYDNVG TQHFQGLQEN QEVACTHI