Gene PHATRDRAFT_40933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40933 
Symbol 
ID7198812 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand+ 
Start bp302522 
End bp303187 
Gene Length666 bp 
Protein Length188 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184857 
Protein GI219129357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.247184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTCA TTAGTCGGCT GCTCAAGGAC CGTATCTTGC TTTTGGGACA GGGTGTGGAT 
GACGAAGTCG CTAACGTGTT GGTGGCGCAG CTATTGTACC TTGCCAACGA AGATCCGGAA 
AAGGACATTA CGTTGTACAT CAATAGCCCG GTACGTATCC GAGACTCCGA ATCAAATAGC 
ATTCATCCTC GGTACAGACC TTAGAACAAC AAACTCACAC GAATCGCTCA CTATTCCTGT 
TTGGTGTAGG GTGGTTCCGT GAGTGCCGGC ATGGCCATTT ACGACACAAT GCAGTACGTA 
CCGTGCGATG TTTCGACCGT TTGTTTCGGA ATGGCCGCTT CCATGGGAGC TTTTCTGCTC 
GGAGCCGGGG CCAAAGGTAA ACGACGGGCT CTGCCCAACT CGCGCATCAT GATCCATCAA 
CCTCTCGGGG GCGCACAGGG ACAGGCGGCA GATATCGAAA TCCAGGCCAA GGAAATCCTG 
TTCATTCGGG AAGTTCTCAA CACGTACATT GCCGAGTACT GTGATCAGCC CAAGGATAAG 
ATCGAGGCCG ATTGCGATCG GGATTTCTTC ATGACTCCGG AAGAGGCGGT CGAGTACGGT 
ATTATTGATG AGGTTGTCAA GACCAAGACA TCCCACATTG TGAAACCGGA AATGCCCATC 
TTGTAG
 
Protein sequence
MDVISRLLKD RILLLGQGVD DEVANVLVAQ LLYLANEDPE KDITLYINSP GGSVSAGMAI 
YDTMQYVPCD VSTVCFGMAA SMGAFLLGAG AKGKRRALPN SRIMIHQPLG GAQGQAADIE 
IQAKEILFIR EVLNTYIAEY CDQPKDKIEA DCDRDFFMTP EEAVEYGIID EVVKTKTSHI 
VKPEMPIL