Gene PHATRDRAFT_40902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40902 
Symbol 
ID7198737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp232506 
End bp233288 
Gene Length783 bp 
Protein Length261 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184923 
Protein GI219129495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTA TTGACAGCAG TGCCCCCGCT TCTTCCGGTA CCGATGCGAA TCCTGCTTCT 
CCTCAACCGA AGCAACCTAA GCCGAAAAAG GCCGTACCAG TCGTCCCACC AGGAATAAGT
ACCGCCTACA TGGTGCTACG TACTGTGATT ACGAGCCTGC TGCCGCCGGA GCAAGAAGAA
ATTACCAGCG TCAGTCCATT CCAAGCGACG TACTTGAAAG AAGGCCGTCC GACAGGAAAA
TTCTTGATAA CATTCAAGCG TCGTGCGGTA AGCACCCAAA CAGGAGGAGG TGGATTTTGG
GACGAGAAGG ATGAGGCATC GTTTTCACCG TTCTGGGATT TGGTCCGAGC TGCCGTCGAT
CGAATAGTGT CGAATACTTC CGGCGACCAG GCCCTTGAAC TAACTTGTAC TAAAACCACC
AAAGATGAAA TTGTGGGTGC GTTTGGTGAA GGGGCGTTAG ACGATGGTAT TCTTAAAAAG
AAAAAGGCAG ACCTCGAGCA TCTGCTGGCT ACCTGTGGTA CCATTAGTAG CGATGGTAGC
ACGACGAGCG CCACGCTGCA GGCTGTGGCT TGCGTCCCAC CGTCGACGCC CTACGCGTCG
ACCAAGGCTT TATCCAACAT TATTTTAGAA ATGGGTAACA TGTGCACCGA AATTAAAACG
CAGAAGAAGA TGGTGCAAAT CAGCTTGAAA TTCGAAGCCG TTGAAACAGA AAACCATGGC
ATTCCGTTGG CGCCCGAAGT TACTGACGGA AGTCCGGCGA GTATGATTGC GCAGCGCAGG
CTC
 
Protein sequence
MTSIDSSAPA SSGTDANPAS PQPKQPKPKK AVPVVPPGIS TAYMVLRTVI TSLLPPEQEE 
ITSVSPFQAT YLKEGRPTGK FLITFKRRAV STQTGGGGFW DEKDEASFSP FWDLVRAAVD
RIVSNTSGDQ ALELTCTKTT KDEIVGAFGE GALDDGILKK KKADLEHLLA TCGTISSDGS
TTSATLQAVA CVPPSTPYAS TKALSNIILE MGNMCTEIKT QKKMVQISLK FEAVETENHG
IPLAPEVTDG SPASMIAQRR L