Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40896 |
Symbol | |
ID | 7198797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 218670 |
End bp | 219575 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184918 |
Protein GI | 219129484 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCTGA GCAAAGACCT GTTACACGTC CTTCGCTTTG GTACGTTGAA CGATATTCGT AAGATCCTGT CCTATCAGCC CAGGCTCTTC CGAGACCATG TCGAGCTCTC TATGGAATTA CCCCTGCACG TTGTCGTACG GGAACAACGG GAACTGTCAA TTCTTCGATT CACTTTGCGG GCGTTTCCAA ACGCAATCAA GGTACCTGAT ATGCATGGAC AGCTTCCCCT ACACGTTGCT GTTCAACAGC GAAACTGGCA TATCAAAGGA AATGGTCCTA TCATTGTTCG GGAGCTAGTT CGCGCTGATC CGACCACCAT TGGCGTGCCG GATTGGAAAG ACGGGTACAC ACCCATGCAT ACGGCGATTC TCTACCGATG TGATCCTGAA ATCATACAGT TCCTACTCCA CTCTTGCCAC GGCTACAACA GTACAATCAA GAATGCCAAC CGACGATCAC AAGCAGGTCG TCTTCGTCGA TTGCCTCAAC CACCACGCCT AGATCCATGC ATGGTTGCAA CCATGACCGG TGGCTATTTG CCACTCCACG TTGCCGTATT TTCCAAAGCT TCCGTGGAGA TTGTGCAGGC ATTGGTGGAC GCTTGTCCAA AAAGCTTGCG TATACCTGAT CAACGGGGTT TCTTGCCAAT TCATTTTGCG ATACTGTCTC TATCGACGAC GTCGGACGGG AGCCCCGAAG ACGGCGCCGA GCGCGACTCC AAGATTTGGA GTATTTTGGG CGGCGATGAG CTTGCGTACG GATCCAGTTT TATGACAAAG AAACAAGCAA AATACCAGCA GTCCTCAAAC CCGCCGATTT CGCAGACGAC GTCCAAAGAC GGCCAATGTT GGGTAGGGAT GCAGAAAAAT GGCACCGAAA ACAAAATCGA AATTTACAGT CGTTAG
|
Protein sequence | MVLSKDLLHV LRFGTLNDIR KILSYQPRLF RDHVELSMEL PLHVVVREQR ELSILRFTLR AFPNAIKVPD MHGQLPLHVA VQQRNWHIKG NGPIIVRELV RADPTTIGVP DWKDGYTPMH TAILYRCDPE IIQFLLHSCH GYNSTIKNAN RRSQAGRLRR LPQPPRLDPC MVATMTGGYL PLHVAVFSKA SVEIVQALVD ACPKSLRIPD QRGFLPIHFA ILSLSTTSDG SPEDGAERDS KIWSILGGDE LAYGSSFMTK KQAKYQQSSN PPISQTTSKD GQCWVGMQKN GTENKIEIYS R
|
| |