Gene PHATRDRAFT_40896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40896 
Symbol 
ID7198797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp218670 
End bp219575 
Gene Length906 bp 
Protein Length301 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184918 
Protein GI219129484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTGA GCAAAGACCT GTTACACGTC CTTCGCTTTG GTACGTTGAA CGATATTCGT 
AAGATCCTGT CCTATCAGCC CAGGCTCTTC CGAGACCATG TCGAGCTCTC TATGGAATTA
CCCCTGCACG TTGTCGTACG GGAACAACGG GAACTGTCAA TTCTTCGATT CACTTTGCGG
GCGTTTCCAA ACGCAATCAA GGTACCTGAT ATGCATGGAC AGCTTCCCCT ACACGTTGCT
GTTCAACAGC GAAACTGGCA TATCAAAGGA AATGGTCCTA TCATTGTTCG GGAGCTAGTT
CGCGCTGATC CGACCACCAT TGGCGTGCCG GATTGGAAAG ACGGGTACAC ACCCATGCAT
ACGGCGATTC TCTACCGATG TGATCCTGAA ATCATACAGT TCCTACTCCA CTCTTGCCAC
GGCTACAACA GTACAATCAA GAATGCCAAC CGACGATCAC AAGCAGGTCG TCTTCGTCGA
TTGCCTCAAC CACCACGCCT AGATCCATGC ATGGTTGCAA CCATGACCGG TGGCTATTTG
CCACTCCACG TTGCCGTATT TTCCAAAGCT TCCGTGGAGA TTGTGCAGGC ATTGGTGGAC
GCTTGTCCAA AAAGCTTGCG TATACCTGAT CAACGGGGTT TCTTGCCAAT TCATTTTGCG
ATACTGTCTC TATCGACGAC GTCGGACGGG AGCCCCGAAG ACGGCGCCGA GCGCGACTCC
AAGATTTGGA GTATTTTGGG CGGCGATGAG CTTGCGTACG GATCCAGTTT TATGACAAAG
AAACAAGCAA AATACCAGCA GTCCTCAAAC CCGCCGATTT CGCAGACGAC GTCCAAAGAC
GGCCAATGTT GGGTAGGGAT GCAGAAAAAT GGCACCGAAA ACAAAATCGA AATTTACAGT
CGTTAG
 
Protein sequence
MVLSKDLLHV LRFGTLNDIR KILSYQPRLF RDHVELSMEL PLHVVVREQR ELSILRFTLR 
AFPNAIKVPD MHGQLPLHVA VQQRNWHIKG NGPIIVRELV RADPTTIGVP DWKDGYTPMH
TAILYRCDPE IIQFLLHSCH GYNSTIKNAN RRSQAGRLRR LPQPPRLDPC MVATMTGGYL
PLHVAVFSKA SVEIVQALVD ACPKSLRIPD QRGFLPIHFA ILSLSTTSDG SPEDGAERDS
KIWSILGGDE LAYGSSFMTK KQAKYQQSSN PPISQTTSKD GQCWVGMQKN GTENKIEIYS
R