Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40877 |
Symbol | |
ID | 7198720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 169871 |
End bp | 170392 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184906 |
Protein GI | 219129459 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.633922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTA AAAGGAGAAA TTACGCGGCA ACCATCTTTT TGACCGCGAC GGCACTGCTG ATTGGCGATA CCGTCGCACT CACGTCCGGT CGCGCTCTTT CGCGATCAGC AAGTGATCGG TATGCGCACC GGGGCATACC TTGTCAATCA TCCTCCGCAC TTCTGTTGAA GGATGGTTCT CGTGACAGCG CCGATAAAAA TTCTCCACAG CGACAGCAAG AAATGCTCAT GGAAGAATTG TCCAAAATTG GTGCCGAAAA AATTGCCGGG CTGGGCGTCG TGGAACGTGC CAAACGCGCC ATGCTGGCTG AAGCCATCGA AGACCGTATC TTCCACCTCA CGGAGGAGAT TGAGGTTCTG CTCGAAAAGA ATGGGACACT AGCTGCGCAG AATCGTGATC GGGCGATAGA GTTGGCCCAG CAAACCAAAG GACTGCAAGT TCAGTACCAT GAACTAGTGA GCGGCCAGCC GTCGTCGGTT CTGCAATCAT TGGAAGCGCT GGACAGCAAC GAAGAGGAGT AA
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Protein sequence | MPAKRRNYAA TIFLTATALL IGDTVALTSG RALSRSASDR YAHRGIPCQS SSALLLKDGS RDSADKNSPQ RQQEMLMEEL SKIGAEKIAG LGVVERAKRA MLAEAIEDRI FHLTEEIEVL LEKNGTLAAQ NRDRAIELAQ QTKGLQVQYH ELVSGQPSSV LQSLEALDSN EEE
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