Gene PHATRDRAFT_40877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40877 
Symbol 
ID7198720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp169871 
End bp170392 
Gene Length522 bp 
Protein Length173 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184906 
Protein GI219129459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.633922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCTA AAAGGAGAAA TTACGCGGCA ACCATCTTTT TGACCGCGAC GGCACTGCTG 
ATTGGCGATA CCGTCGCACT CACGTCCGGT CGCGCTCTTT CGCGATCAGC AAGTGATCGG
TATGCGCACC GGGGCATACC TTGTCAATCA TCCTCCGCAC TTCTGTTGAA GGATGGTTCT
CGTGACAGCG CCGATAAAAA TTCTCCACAG CGACAGCAAG AAATGCTCAT GGAAGAATTG
TCCAAAATTG GTGCCGAAAA AATTGCCGGG CTGGGCGTCG TGGAACGTGC CAAACGCGCC
ATGCTGGCTG AAGCCATCGA AGACCGTATC TTCCACCTCA CGGAGGAGAT TGAGGTTCTG
CTCGAAAAGA ATGGGACACT AGCTGCGCAG AATCGTGATC GGGCGATAGA GTTGGCCCAG
CAAACCAAAG GACTGCAAGT TCAGTACCAT GAACTAGTGA GCGGCCAGCC GTCGTCGGTT
CTGCAATCAT TGGAAGCGCT GGACAGCAAC GAAGAGGAGT AA
 
Protein sequence
MPAKRRNYAA TIFLTATALL IGDTVALTSG RALSRSASDR YAHRGIPCQS SSALLLKDGS 
RDSADKNSPQ RQQEMLMEEL SKIGAEKIAG LGVVERAKRA MLAEAIEDRI FHLTEEIEVL
LEKNGTLAAQ NRDRAIELAQ QTKGLQVQYH ELVSGQPSSV LQSLEALDSN EEE