Gene PHATRDRAFT_40863 details

Gene Information

• Locus tag: PHATRDRAFT_40863
• ID: 7198711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 133174
• End bp: 133959
• Gene Length: 786 bp
• Protein Length: 261 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002184831
• Protein GI: 219129303

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00925833
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATCT CTCCCGACTC TTCCAACAAG ACGAACTTCC CGTGTACAGG AGTTGCCACT 
GCCGTCGATG GTTCCGGGAT CTCCATGGGA ATCGGTTCCT CAAACACGCA TGACGTCTAC 
AGTTGGGGAA CGTCCAACGC ATCGGGGAAA CTCTGTCGTC GGGACCCTCT GGATCATCCC 
ACACCCCGCC ACGTCCCCGC AAAGGCGCAT TACGACGGTC CGTCAGTACC GCGACGTGTC 
TACGTGGGTG GGACGGAAGA ATCAGGACAC GCCGCTCTAC TCACCATGCA CGGTGAACTC 
TGGATGTGCG GATGCGATCG TTGGCAACAA CTTGGACTCG GCAGTCCACA CGGTGGAGCC 
AGTGGCTACA CCTGGACACA GATATGGCAT ACACAATTTC AACGTAACCA CTTTGTTAGT 
AACCACGTAA CGATACGGGA TGTGGCCCTG GGCGGGGATC ATACCCTCGT GCTGGCCAAC 
GACAAGGACG GTACCGTCTA TTCCTTCGGG AAGGGGGCCG AAGGACAGTT GGGACTACGC 
ACCAAACCAT TTGTGCACGC CCCAACGCCA TCCCCAAAAC TCTCCCATCC CCACAATGCT 
GCCGTGTGTG CCATAAGGGA TTGCTCTCTG ACGTTGGATC CAGAAGGAAG GGTACAACAA 
ATGGCGGGCA AATGCCGTAA CTTCGAGCAA GCCTTGGCTG CCTGTCGACA ACGAGCACGG 
ACCCACGGAC TGCTCCAAGA AAGCGACAAA TCTGCCTCGG GTGAAGACAC TGCGCCATCC 
GCTTGA 

 

Protein sequence

MAISPDSSNK TNFPCTGVAT AVDGSGISMG IGSSNTHDVY SWGTSNASGK LCRRDPLDHP 
TPRHVPAKAH YDGPSVPRRV YVGGTEESGH AALLTMHGEL WMCGCDRWQQ LGLGSPHGGA 
SGYTWTQIWH TQFQRNHFVS NHVTIRDVAL GGDHTLVLAN DKDGTVYSFG KGAEGQLGLR 
TKPFVHAPTP SPKLSHPHNA AVCAIRDCSL TLDPEGRVQQ MAGKCRNFEQ ALAACRQRAR 
THGLLQESDK SASGEDTAPS A