Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40830 |
Symbol | |
ID | 7198696 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 46266 |
End bp | 47350 |
Gene Length | 1085 bp |
Protein Length | 311 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184817 |
Protein GI | 219129273 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATT CTAACAAATG GCGTAGTCCA ATTGCTTTTG ACACAGACAA CGAGGACGTT TCGGTGGAAA CGGAAGGAAA CACTCCGTCC GCAGCAATCA CAGCAACTCC CCCAGCGCGC GAGGAATTGT TAGCGATCGA ACCAGGGGTC CTGAATGACT TGATCCGAGA TATGAAACGT CTGGCTCTGG ACTCTCCACT ACCTCTTACA GACGAATACG AGCGGGGAAA AGTGAGTCGA GCGGTAAATG TAATGTCCAA TCTTGTCTGT CATCGAGTCT AATTCCACTT GCTCCTCTTT CGAACAGAAA CAGCCAGATC AGCACGAAAC GAATATCGAG TCGTCGTGCG ACACAAGTGT TCCAGATGAT AGTCATTCAT CATCAGGACA AGGGTTTCAT TACGACATTA ATGAGCTAAC AACAATATTG ATGTCTCTCA ATCGCATTAT TTCCAAACAC GAAAGTCGAA CGGAGCAGCA ATCTTCTCCC AAAGCTGCAG CCAACGAGAA GGAAAACAAG GTACGCTGTC TCGCTTGTGG GCATTCTGTC TCGCCTTTTT GGATTTTGCA ATCTTAACAC AAATTGTTCC CAGGTGGTAG ACGTCGAATC ATCGTCTCTG TCTCCGACAA ACCAGAAGTT GAGTGACACC ATTTGCTTTC ACCCGCAACT GCAATTCTCT TCCATTGTCT CAGCCAAGGC GAAGGAAATG CAAGATTTTG AGGTTTGTTA CAGGGACGTA GAATATGTGT CAAAAAAAGA GAGAAAAATC AGCAGATCGG TGAAAAAGGG CCTTTCAAAA GAAGAACAAG CCACCAAAGA TGCTGCAAAT CTCATTTGGG TAAAAAGTGG TCGCAAATCT TCACAACCTG CTTTTATTGT CAACAGTGGA ACCAAACGGT ATGATTTACA TGGAAAGCCT CTTGTTCATA TTGTCTGGTC TTTTTCTGAA ACAGCAGATT GGGTGAATGC TGCCAAAGTT GATTGGTCAG ATGGCAAAGA AAACGTTGCC ACAAACATGT TCGATAAGCA GAATAGGATT TTCTATGGCA TGGACAGTGA TGAGGAGGAC AGCGAGGACA AATAG
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Protein sequence | MINSNKWRSP IAFDTDNEDV SVETEGNTPS AAITATPPAR EELLAIEPGV LNDLIRDMKR LALDSPLPLT DEYERGKKQP DQHETNIESS CDTSVPDDSH SSSGQGFHYD INELTTILMS LNRIISKHES RTEQQSSPKA AANEKENKVV DVESSSLSPT NQKLSDTICF HPQLQFSSIV SAKAKEMQDF EVCYRDVEYV SKKERKISRS VKKGLSKEEQ ATKDAANLIW VKSGRKSSQP AFIVNSGTKR YDLHGKPLVH IVWSFSETAD WVNAAKVDWS DGKENVATNM FDKQNRIFYG MDSDEEDSED K
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