Gene PHATRDRAFT_40830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40830 
Symbol 
ID7198696 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp46266 
End bp47350 
Gene Length1085 bp 
Protein Length311 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184817 
Protein GI219129273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATT CTAACAAATG GCGTAGTCCA ATTGCTTTTG ACACAGACAA CGAGGACGTT 
TCGGTGGAAA CGGAAGGAAA CACTCCGTCC GCAGCAATCA CAGCAACTCC CCCAGCGCGC
GAGGAATTGT TAGCGATCGA ACCAGGGGTC CTGAATGACT TGATCCGAGA TATGAAACGT
CTGGCTCTGG ACTCTCCACT ACCTCTTACA GACGAATACG AGCGGGGAAA AGTGAGTCGA
GCGGTAAATG TAATGTCCAA TCTTGTCTGT CATCGAGTCT AATTCCACTT GCTCCTCTTT
CGAACAGAAA CAGCCAGATC AGCACGAAAC GAATATCGAG TCGTCGTGCG ACACAAGTGT
TCCAGATGAT AGTCATTCAT CATCAGGACA AGGGTTTCAT TACGACATTA ATGAGCTAAC
AACAATATTG ATGTCTCTCA ATCGCATTAT TTCCAAACAC GAAAGTCGAA CGGAGCAGCA
ATCTTCTCCC AAAGCTGCAG CCAACGAGAA GGAAAACAAG GTACGCTGTC TCGCTTGTGG
GCATTCTGTC TCGCCTTTTT GGATTTTGCA ATCTTAACAC AAATTGTTCC CAGGTGGTAG
ACGTCGAATC ATCGTCTCTG TCTCCGACAA ACCAGAAGTT GAGTGACACC ATTTGCTTTC
ACCCGCAACT GCAATTCTCT TCCATTGTCT CAGCCAAGGC GAAGGAAATG CAAGATTTTG
AGGTTTGTTA CAGGGACGTA GAATATGTGT CAAAAAAAGA GAGAAAAATC AGCAGATCGG
TGAAAAAGGG CCTTTCAAAA GAAGAACAAG CCACCAAAGA TGCTGCAAAT CTCATTTGGG
TAAAAAGTGG TCGCAAATCT TCACAACCTG CTTTTATTGT CAACAGTGGA ACCAAACGGT
ATGATTTACA TGGAAAGCCT CTTGTTCATA TTGTCTGGTC TTTTTCTGAA ACAGCAGATT
GGGTGAATGC TGCCAAAGTT GATTGGTCAG ATGGCAAAGA AAACGTTGCC ACAAACATGT
TCGATAAGCA GAATAGGATT TTCTATGGCA TGGACAGTGA TGAGGAGGAC AGCGAGGACA
AATAG
 
Protein sequence
MINSNKWRSP IAFDTDNEDV SVETEGNTPS AAITATPPAR EELLAIEPGV LNDLIRDMKR 
LALDSPLPLT DEYERGKKQP DQHETNIESS CDTSVPDDSH SSSGQGFHYD INELTTILMS
LNRIISKHES RTEQQSSPKA AANEKENKVV DVESSSLSPT NQKLSDTICF HPQLQFSSIV
SAKAKEMQDF EVCYRDVEYV SKKERKISRS VKKGLSKEEQ ATKDAANLIW VKSGRKSSQP
AFIVNSGTKR YDLHGKPLVH IVWSFSETAD WVNAAKVDWS DGKENVATNM FDKQNRIFYG
MDSDEEDSED K