Gene PHATRDRAFT_30823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30823 
Symbol 
ID7198739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp236411 
End bp237455 
Gene Length1045 bp 
Protein Length343 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184925 
Protein GI219129499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGAAACATC TGGACAATGC CTACCATGCC CTTTGATGCC ACACACATTC GGCGTGGATT 
GACGATCGCG GCACTCGTAT GGGCATGGAT CCTGCCCGCA GACGCCAACG CCCTACGTGT
CCCCACGGGT GCACGGACTA CCGATTGGTA CGAACATCCG GAAATTCCGC GCCAACCCAT
CGGCGTCGAC GTACACGGCT TGCCCGTCCA CATTCCGCTA GTGGGTGCCG GTACCTGGCA
ATACAACGAC ACCGTCGCCT TTCAATCCTT GTGCAAGGCT TTTGGTGAGG GAATAACCCT
GGTCGATACC GCCTTAGGCT ACGGCAACCA AAAAGGTGTG GGTCGCGCCA TTCGAGACTG
TTACGTGGGC CGACGAAGCG ATTTATTCGT CTTGACCAAG ATTCCGGGCG GACTTTCCTA
CGAGGAAACC TTGGGTGCGC ATCACCAAAA CATGTTCGAG CTAAATCTGG GTTACGTGGA
CCATTTGATG GTGCATTTTC CGTCGGATTG GCAACAGACC AAAACGGGAC GAGCGCAGCG
TCAAACGCAG TGGAGAGCAA TGGAAGAAAT CTATTACAGC GGCAAGGCTC GTTTCATTGG
AGTATCTCAC TACTGTTCAC AGCATTTACA AGATGTGCTG GAGATTGCGA CGGTTCGACC
GAGTCTCAAC CAGATTGAAT ACCACGTTGG ATCGGGCGAC GTGGATGCCG TACTGGAAAC
GTGCCGAACC GAGAACATTA CGTGCATGAG CTTTTCTCCC CTCTGCGGCC CTTGTCAATA
CGAACCGTCC GATTCTCTCA TTAGTGGAGA CTTGGTGACG GAGATTGCGG CCCGCTACCA
ACACGGTAGC AACGAAACGC GGCCTGTGAC GGGCGCGCAA GTGGCTTTGC GTTTTATTGT
CCAACAAGCT CTGGAAGAGC GTCCTTTGTA CATTGGTCCC GTCGTCCCCA AAAGTAACAA
TGCGGATCAC ATTCGGAGCA ATCGTGATAT ATTTGATTTT GTCTTGAGCG ATGTCGATAT
GGAACGTCTG CGGAATGCGA CCAAA
 
Protein sequence
MPTMPFDATH IRRGLTIAAL VWAWILPADA NALRVPTGAR TTDWYEHPEI PRQPIGVDVH 
GLPVHIPLVG AGTWQYNDTV AFQSLCKAFG EGITLVDTAL GYGNQKGVGR AIRDCYVGRR
SDLFVLTKIP GGLSYEETLG AHHQNMFELN LGYVDHLMVH FPSDWQQTKT GRAQRQTQWR
AMEEIYYSGK ARFIGVSHYC SQHLQDVLEI ATVRPSLNQI EYHVGSGDVD AVLETCRTEN
ITCMSFSPLC GPCQYEPSDS LISGDLVTEI AARYQHGSNE TRPVTGAQVA LRFIVQQALE
ERPLYIGPVV PKSNNADHIR SNRDIFDFVL SDVDMERLRN ATK