Gene PHATRDRAFT_30786 details

Gene Information

• Locus tag: PHATRDRAFT_30786
• ID: 7198789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: -
• Start bp: 152139
• End bp: 154572
• Gene Length: 2434 bp
• Protein Length: 445 aa
• GC content: 49%
• Product: xylose isomerase
• Protein accession: XP_002184902
• Protein GI: 219129451

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.133263
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAACTTTAG GGAGGAGCGA GAGTGGGAGC AGCAAAAATG AGGAGAAAGA TACCGAAGGT 
TTCGGAGATC CAAACGAGAA TCGATGGCCG GTCGTGCCCG TTGAGCCGGG GTAGAGTAAA 
AAATTGTCGG ATTCCTTTGA TTGATGTCTT CGTCGAATGA AATTGTGAGG AAGGGTGTCA 
ATAGTCGTGT CAGAACACCT GGATTGTAAC CAATCAGCGA GCTACAAAGT GACGTTGACG 
AATGCGTATC TATCGTAGAA CAAAACGATC GTTTCCTATT ATTGGGATCC TTCACAACGG 
CGTATATTTA TGATGTCTTG CAGCGCAATG GGGGATCCAA AAGAATGAAA GGAATGTCCC 
TGTCAAAAAG AACATGAACA CCGGTGTGGA GGTAAGTACC GCTAGTCTCT TCGAATAGGC 
CAGACTTTGC TACGTAGCCG CAACGGAGGC TTTGTGACAA TATGTACGGT GTCCCTATCG 
AGATGAAGAG ATCTAGTTAT GGATGCATCC CGTTCCGTGA GTTGGCGCAA TCCTAGCAAC 
CTACGAGGCA TCTCTTGAAA AGTAGTATGG ACAGGTCACT CTAGCAGATA GAAAGTCGCA 
ATGCGGGCAG ATACTCAGTT TTTGTCTGAA AGGGCTTGTT GTGGAATGGG ATCTCGGAAT 
GATTTTGAGT TTGTAGCGTT GGAAGCGTTG ACAAGTGAAA ATGATAGTGT CGGATAGCGA 
TAACACTTCA GAGAGAAGTG TCTCCACGCA ATGCTTTTCT TGTCATGATT GTCGATCCGT 
TCGGGACGGG ATATCCCTCT CGACGGGCTG CTTACTTCCA GTCGAAACCA GGCGATTGTG 
ATGCCTCTCC AAAAATACTA CCTACTTTTC TTGAAGTCAC GTTAAGGAAC GGGTTTAGGG 
AACAAATCCA TACCCTTCTT GATGTCATCC TTTATCTCAT TCTCCACCTT GTTTCATTCT 
TCCATCCTTT TGACGGTGAC TTGCTGGTGT TATTGCCGAA ACAGCTCTCC AGTACAGCTG 
CATCATGCCA GAGTTCTTTG CCGACAACGT TCCGGAGACT ATTCCGTACA AGGGTCCAAC 
GTCGAAAGAT CCTTTTTCCT TTCGTCACTA CAACCCTGAC GAGAGTATCC TTGGCAAGCC 
CATGAAGGAA TGGTTGCGTT TCAGTGTATG CTTTTGGCAT ACGCTCGTGG GTGGCGGCGG 
GCAGGATCCT TTCGGAGCAA AAACTTTGCG ACGACCTTGG GAAGACGGCA TCGACGATGC 
CCTGGAGCTG GCCAAAAGGA GCATCGACGT GGCGTTCGAG ATCTTTACCA TTCTTGGAGT 
CGAGTACTAC ACCTTTCACG ATTTCGACGT GGCGCCGGAA ATGGCCACGC TCAAGGAATC 
GCAAAAAGCA CTCGAGGATG TTGGCGACTA CCTACTGAAA AAACAAAACG AGTCGGGTGT 
CCGGCTTTTG TGGGCGACAC AGAATCTCTT TGCTCATCCG CGTTATATGC ATGGTGCCCT 
GACGAATCCG GATGTACACG TCTTCTGCTA CGCCGCGGCG CAAATTCAGA ATATTATGGA 
CTTGAACGCC AAACTCGGCG GGGCCAACCA CGTCTTTTGG GGCGGCCGCG AAGGCTACCA 
AACCCTCTTG AATACGGACG TCAAACAAGA GTGCGATCAC GCAGCCGCCA TGTTTCGCAT 
GGCCATTGAT TACAAAGCCC GCAAAAACTA CACGGCCCAG TTCTTGCTCG AACCCAAACC 
GCGGGAGCCC ACCAAGCATC AGTACGATTA CGACGCCCAA ACAACTATGG CGTTCTTGCA 
CGAATACGGG TTACAGGATC AATTTCTGCT GAATATTGAA CCGAATCACA CGACATTGGC 
AGGACACGCT CCCGAACACG ACGTGGTCGT GGCCAGTGCC TACAACATGC TCGGTAGCAT 
TGATTCCAAT ACCGGTGATA CCCTGGTCGG CTGGGATACC GACCAATTTC CAATGAATTT 
GCAAGACACG ACGGCCATTA TGAGTGTCGT CCTGAAACAG GGAGGTTTCC AAAAGGGGGG 
ATTGAATTTT GATTGCAAGG TGCGACGTGA AAGTGTGGAT CCGGAAGATA TCATTCTCGG 
TCACGTGGCG GCCATGGATT GCTACGCTCT AGGTCTACGC AAGGCTGCCG CAATGCAGCA 
AGCCGGCGAG CTTGATAGTA TGCTCCAGGC TCGCTACGCT TCCTGGCAAA CGGGAAGTCT 
GGGTAGAAAA ATAAGCAATG GTCAGGCCAC CTTGGAAGAA TGCGCCGAGT ACGCCAAAGA 
GAAGGGAGAG CCGGTTTTAC AGTCCGGGAA ACAGGAAATG TTTGAAATGG TTCGCAATCG 
TTATCTATAT CCCGGCAATT AGACAAAGGA CGGAGTTCAT CCATTCGAAA GCACTACCGT 
ATAAAACTCA ATAGCCAGAA TAATGTTGTT TTTG 

 

Protein sequence

MPEFFADNVP ETIPYKGPTS KDPFSFRHYN PDESILGKPM KEWLRFSVCF WHTLVGGGGQ 
DPFGAKTLRR PWEDGIDDAL ELAKRSIDVA FEIFTILGVE YYTFHDFDVA PEMATLKESQ 
KALEDVGDYL LKKQNESGVR LLWATQNLFA HPRYMHGALT NPDVHVFCYA AAQIQNIMDL 
NAKLGGANHV FWGGREGYQT LLNTDVKQEC DHAAAMFRMA IDYKARKNYT AQFLLEPKPR 
EPTKHQYDYD AQTTMAFLHE YGLQDQFLLN IEPNHTTLAG HAPEHDVVVA SAYNMLGSID 
SNTGDTLVGW DTDQFPMNLQ DTTAIMSVVL KQGGFQKGGL NFDCKVRRES VDPEDIILGH 
VAAMDCYALG LRKAAAMQQA GELDSMLQAR YASWQTGSLG RKISNGQATL EECAEYAKEK 
GEPVLQSGKQ EMFEMVRNRY LYPGN