Gene PHATRDRAFT_23723 details

Gene Information

• Locus tag: PHATRDRAFT_23723
• ID: 7198756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 307882
• End bp: 310197
• Gene Length: 2316 bp
• Protein Length: 330 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002184859
• Protein GI: 219129361

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCTGTTCTG TTCGGTACCG TGTCGACTGC ACCTTTCCCT TTACTCCACC ACCGGTCCTT 
TCCTTTGATG AGTCCATCAA GCAGAAACGG CCGTAGTCGG GAAAGTCCCG TCACGGCGGT 
CTCCAACCGC ACGACCCTGG CGTCCGAAGT CATCGCTGCT TCTGTCGGCG GTGCCATTTC 
CGCAGGCGTC CTGTATCCGC TCGAAGTCCT CAAGACGAAA ATGCAAGCCC AACACGACGA 
CCGTGACATG GATGAGCAGG CCACTACTAT GTGGAGGTAC GCCGCCCGTC TCTACCGTCA 
ACAAGGTTGG CAAATCTTTG TTCGCGGTCT GGAAACCTCC GCTCTACAGT CCGCTACGGA 
AAAGGCCCTC TACTTCTTTG CTTACACAAT TTTAAAGAAC GCCCACCAAT CTGTGACGCA 
CGGGAAAGCA CTCGGGACGG CCACCAATTT GGTGTTGGGC TGTGCAGCGG AATGGGTACA 
TTTGCCCGTT TCGCTCCCCA TTGACGTGTG GACGACCAAA ATTCAAACCA GCAGCAGTGC 
CGACCAAACC CCGCTGAAAA TCCTACTCAC CATGCTCGCC GAGCCCAACA AAGCGCAGTG 
GTACCAGGGT TGGTCGGCCT ACACGCTACT CTGTTTGAAA CCGGCCCTGC AGTATACCGT 
CTACGAGCAA GTCAAAGCGG CAGTCGTTCA GACGCGACAA AATAAGACCC TTACGGCCGT 
GGAAGCCTTT CTGCTCGGTA TGGTGGCGCG GACCGTAGCC ACCGTTGTTG TCTTTCCCTT 
TCTACGAGCC AAGGTCCTTC TGCAGACCGC CAAAGAACCC GACACTGCCA GTGCATCCCT 
ATCCACCACG ACATCCAAAC CCAGCGTGAT TACCCTGCTG ACCAAAGTGT ACGAACGGGA 
CGGTCTCGCT GGACTCTTTC AGGGGCTGGG ACCGGAATTG ACGCGCGGAA TATTCTCGGC 
CGCACTTATG CTCATGATGA AGGAAAAGTT GGCGAGCCGG GTTCAACGAG CACTGGATGC 
AAAGTCTAAC AACGTGGAAA TTCGCTCCGC TATTCGATAG TACCGGAACG ATTGGGTAAA 
GTGTTGGACT CGGTGGGAAC AGCCGAGATA GGACAACGTT TGTTTCTCAT TGTGTATTTA 
ACCAAATTAC TTACTGTTAA TAGTCGCGGT TGATGGCTCT TGCTTTTGGT CAGCCCATGG 
AAATGAGGCA GCGATTTGCG AACTGTATCA CATTGCGGAA ATCCCGGCTT ACTTTGCTTC 
TGGTTGACTG CCGCTGGGTG TTGCGGTGGT GTAGTCAAGT AACATGTCGC GTAACGCGTC 
GTCCATTGCT GTCGGTTCCA AGCCAAACGC TTTCCGCATT CCGGTATCGT CTACACTGTA 
ATCGTTCTTC CAAAAGGGCA TCATTTCAAT GATCTCCCAC AAGAACGGAA TGAACAATCC 
CAAAAGGTAA CACGAGAGAA CACCTAAAAC GGAAACGGAA TGTTTGTCAG TGGATGACGA 
TGGATCGTGG AGTGTAGCGA TGCGATTCGC CAAATCCTGC ATGCTTTGAT TCTGTATGCT 
ATTAGGAACA ACCCAGAACG AATCGTACAA CGCATTTTCG TGGTCAGGGT CGACAGCTAA 
GGCCAAGGCC CGGGCGACGT CGGGAACAAA ACAAAAGTCG TGCTTAGCGT CCTTGGACCC 
AAAGCAAAGC GGAGTGGAAC CCTGAACAAT TTTTCCCATG AAGGTGTCAC CCAACATAGA 
CTTTTCTCCC ACATGTTGGC CCACAAAGTC ACTGGCGCCT ACTACGGCGA GCGTTCCCGG 
AAATTTGGTC ATATGCTCTT GAAAGCGTTC GTGCAAGAGC GCCCGCACCG CGGGTTTGCT 
ATGGGTTCCG GCTGGAACAC GACCGTCCTG GGGACCGCGC TGCGTACCAG GTCCGTACGC 
GTACAAATTG TCTTGAAAGA CAAGCTTCGT TTTGGTGGAT TCGCTGTGGG TGATGGTGGC 
CAAGAGATTT TCGGTCACCA GGGGCCATCG CTGAGCCCAG TATTTGCGCT TGTACTCGGT 
AAAGCCCACG CAGCAAAAAA TCACATCGGA GGACTCCGTT ATTGATTTGA CACTCGCAGC 
GTCAAAGATG TCCCCTTGTA CGATCTTGAC GTTTGGGAGT TTCTCCAAAC CCAGGCGACC 
ACCATCGGTG GATCGAGAAA CGGCCTGAAT CTTACAGTTC GGATACTCAC GAGAGAGGAT 
CTCACAAAGA GCGGTTCCTA CTCCCCCCGT GGCTCCAAAA ATCACAATGT GCTGAGAAAT 
CATGGCGAGT GTGGATTGTG AGATCGCTTA TCGATG 

 

Protein sequence

MSPSSRNGRS RESPVTAVSN RTTLASEVIA ASVGGAISAG VLYPLEVLKT KMQAQHDDRD 
MDEQATTMWR YAARLYRQQG WQIFVRGLET SALQSATEKA LYFFAYTILK NAHQSVTHGK 
ALGTATNLVL GCAAEWVHLP VSLPIDVWTT KIQTSSSADQ TPLKILLTML AEPNKAQWYQ 
GWSAYTLLCL KPALQYTVYE QVKAAVVQTR QNKTLTAVEA FLLGMVARTV ATVVVFPFLR 
AKVLLQTAKE PDTASASLST TTSKPSVITL LTKVYERDGL AGLFQGLGPE LTRGIFSAAL 
MLMMKEKLAS RVQRALDAKS NNVEIRSAIR