Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16540 |
Symbol | |
ID | 7198790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 165042 |
End bp | 166337 |
Gene Length | 1296 bp |
Protein Length | 432 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184904 |
Protein GI | 219129455 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0854587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGCAA CTCACGAATC GGGTGCCAAT TTGAGCCTCG AATGGCGTCG TCAACAACTC TTGAACCTCC GCGCTATGCT ACGCAACCAT TGGACGGAAC TACAAGGAGC CCTGGCGAAA GATCTCGGCA AGGAAGCGAC GGAAGCTGTT TGTACCGAGC TCGCACTGGT GGACCAAGAG GTTTCTCTCA TGCTCAAGAA CGTCGAAGGT TGGATGAAGC CTTCCAAGGT CCCGAGTCCC GGTTTTTGCG CTCCGGCCTT TTCGAAAGTT ACGCCCCGTC CACGCTCGGG ACCCGCTTGT TTGGTCATTG CTCCGTCCAA TTATCCGGTG TGCCTCTTGT TACAGCCCCT GGCGGGTTCT CTGGCGGCAG GCAATCCTAC CGTTCTAAAA CCAAGCGAGC TCTGTCCGAC GGTCAGTGCG CTCATGCAGC GTCTGGTATC GCAGTACTTT ACGCCCGGGG CTGTCCAAGT CGTTACGGGT GGCGCGAGCG AAACCACTCA ACTTTTGCAG CACTCGTGGG GTCTCGTCTT TTTTACCGGT AGTCCCAAAG TAGGCGAAAT CATCGCCACG GCGGCAGCGG CAACCTTGAC ACCCTGCGTC CTCGAACTGG GCGGAAAATC CCCGTGTTAC GTAGACGAGA CGGCACCCAG CGATATTCGC ATGATTGCCA ATCGCATCAT CTGGACCAAA ACTCTCAACG CCGGGCAAAC CTGCGCGTCC ATTGATTATC TCGTCGTCCA CGAGAAAATT CTCCCGAAGC TCTTGCCGGA ATTGCAGCGA TCTTTACAAG TGCAATTTGG CGAAGACCCG CAACAGTCGG AACTTGCCCG ATTGGTAACG GCAAGCCATG CGTCTCGTCA AGTCGAACTC ATTCGGGAAG TCGAGGAAGC CGCGGCAGTG GAGGATTCGG AAACCACGAT TGTATGCGGT TCGTCCGAAT CCTGCGACCC CGAGTCGGGC TATGTGGCAC CCACAATTGT CCTGAATCCG CCCGAGTCTT CTCGTATGCT ACAAGAGGAG ATCTTTGGAC CCATCCTACC GATACGGGTC GTGAGATCAC GCGACGAAGC CGTCAGTCTC ATGCGCCAGA CGCCCGGTAC TCCCCTATGC CTGTATGTGT TTACCAAATC CCAGTCCGTG TTTGAAGCAC TGTGCAACAA GATCCCATCC GGTGCTGCCG TCCGTAATGA TGCCATCATG CACCTGTCAT CGTCACATTT ACCGTTTGGA GGCCTGGGGA CCTCTGGATA CGGTATGTAT CGCGGGAAAA CCTCGTTTGA TACATTCTCG CACAAA
|
Protein sequence | MEATHESGAN LSLEWRRQQL LNLRAMLRNH WTELQGALAK DLGKEATEAV CTELALVDQE VSLMLKNVEG WMKPSKVPSP GFCAPAFSKV TPRPRSGPAC LVIAPSNYPV CLLLQPLAGS LAAGNPTVLK PSELCPTVSA LMQRLVSQYF TPGAVQVVTG GASETTQLLQ HSWGLVFFTG SPKVGEIIAT AAAATLTPCV LELGGKSPCY VDETAPSDIR MIANRIIWTK TLNAGQTCAS IDYLVVHEKI LPKLLPELQR SLQVQFGEDP QQSELARLVT ASHASRQVEL IREVEEAAAV EDSETTIVCG SSESCDPESG YVAPTIVLNP PESSRMLQEE IFGPILPIRV VRSRDEAVSL MRQTPGTPLC LYVFTKSQSV FEALCNKIPS GAAVRNDAIM HLSSSHLPFG GLGTSGYGMY RGKTSFDTFS HK
|
| |