Gene PHATRDRAFT_16455 details

Gene Information

• Locus tag: PHATRDRAFT_16455
• ID: 7198680
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 340121
• End bp: 343013
• Gene Length: 2893 bp
• Protein Length: 683 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002184866
• Protein GI: 219129376

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTTTCGGGA AGGATTTGAA ACGGACTCTG GTACAGGCCG GCAAGCTCGC CGACCAAATG 
GGTTCCACCA CGGTGGGATC GCAACACGTT TTCTTGGCAC TCCTCGAATA TTCCGAAGGT 
GGTGGCGGGA AAGACAAGGC CCCAGCTTCA GCCGCGACGT TGGATCCGGA CAGCGACGAG 
TGTGGAGGTT GGGCGGTACT CGTGAAAATG AACGTCCTGG ACGATACCGT CACGGCGTTG 
GACGTTTGCG AATCGCTCCT GCAAAATATG GCCGACCAAC CCGACCAAGC CCGCAGGGAA 
CTAGTCACGG GCGCGGGTGG GTCGGGCAAG ATGCCCACGC TTACGGAATG TGGAGTTGAT 
CTGACGCAAC AAGCTGAGGA TGGATTGTTG GATCCGGTCT ACGGAAGGGA CGACGAAACA 
CGAGCCTGTG TACGCACCTT GATTCGGCGG CGCAAAAACA ATGTTTGTTT GATCGGTGAA 
CCAGGTACGT TGGATCCGTG GTGGCCTTGG TAGGGTGGGT CGGTACCGAG CGCCGTTCGT 
ACGGATTCTT GAGCTCGTCG GGGTTTTGGC AATGGCAAGA ATATCTAACA CTGTGCCGGC 
TTCTTTTGGA TTTTCGCATC GAGTAGGTGT TGGAAAGGTA CGACATTTTC CGTTGTTACA 
AACGGGTGCG CATCGTTGGG AATCCGTACG GACTCTCACT TTGCCTTTGC GTTTTCTTTT 
CTGCTGGTGT TGGGAACGGT GCGTAGACGG CCATCGCCGA GGGCGTCGCG CAGATTCTTG 
TGGACGAGAA GCTCTGTCCG GCCCGCCTCA AAGGCCATCG CCTCTTCAGT TTGGAACTAT 
CCAATCTCGT GGCGGGCACC AAATACCGAG GAGAGTTCGA AGAACGGTTG CAGTCCATTA 
TTAAGGAAGT CACCGACCCC AAGGCTCCGC CAACGATTCT TTTCATTGAC GAAATTCACA 
ATCTCGTGGG GGCAGGGGCG GCGGAAGGCG GCATGGATGC GGCTAATTTG CTCAAGCCCG 
CGCTCGCTCG GGGGGAACTG CAACTCATCG GGGCGACCAC AATTATGGAG TACCGCAAAT 
ACATCGAAAA GGACGCAGCC TTGGAGCGCC GGTTGCAGCC GGTTATGGTC AAGGAACCGT 
CCGTTGTGCA GACCATTGAT ATTCTACAAG CCGTCCAGTC GAACTACGAA AAGCACCACG 
GGGTCACGTA TACATCGGCT GCGCTCAACG CCGCCGCCAC CTTGTCCGAT CGATACATGA 
CCGATCGATT TTTGCCCGAC AAAGCGTTGG ATCTGTTGGA CGAAGCGGGG GCTATTGCGC 
ACTTGGAAGA GCCCGATGAG GATGTCACAC CGGAAGTAAC GGAACATACC GTCGCGATGG 
TAATCAGTGA ATGGTCCGGT ATCCCCATGG GAAAACTGGA AACGCAAGAA ATGGATCGTT 
TACAGGCACT CGAAGGTGAA ATGGGACGTC GCGTCAAGGG ACAGGGCCGG GCCATTCGTG 
GTGTAGCCCG TGCCGTCCGT CGGGCCCGGT CCGGATTGCG CGATCCACGC CGACCCGTCG 
CTTCGTTTTT GTTTTGTGGG CCGACCGGAA CGGGCAAGAC GGAATTGTGC AAGACACTGG 
CGGAGACCTA CTATGGCTCG GAAAAGGACA TGATTCGTAT TGACATGTCG GAATACATGG 
AAAAGCATTC CGTGAGTCGG TTAACAGGGC CACCACCAGG GTAAGCAAGT AGCGTTGAAC 
AATGGTGGCT GACGTTCTTC GCTTATCGTC ATGGAATTCC TCACGAATTT GTTCTGCTTT 
CACTCGTACT CTCAGATACA TTGGATACGA AGAAGGGGGT CAATTGACGG AGGCCGTACG 
CCGTGCACCA CATTCGGTGG TGTTGCTCGA CGAATTGGAA AAGGCGCACG GAGACGTTCT 
CAATATTTTG CTCCAAGTTA TGGAAGATGG GATGTTGACG GATGGTAAGG GCCGAACAAT 
CAACTTCAAA AACTCCATTT TGGTCATGAC TTCCAATGTG GGGAGCCGGC GGATTCTGGA 
AGTTGCTCGT TCTGGTAGTG GCGCTTCCGG TGCTATATCT ACGCGGCCCA TCCCAGTCGC 
CGCCGCTTCT GCCGACACCA TGTCTATTGA GCCCATGAAG CCGGAAGAAA TTTTAAAGAA 
AATGCAGAGC AACCCTGAAG CAGCCTCTCT ACTGCTAGAA GCCTCGTCGG ACCCAAAAAT 
TATGGGTGCC ATCCGGACCG CCATGAACGG TTCTCCAGCC GATCTGCTGA AATCAGGCCG 
AGAAGATCCG GAAGTAGCAA AGTTTTTGCA AAGGCTGTGG GGTGTACTGC AAGATGAAAA 
GCCTTTGGCG AATGGTGACT CGAAACGTCC CAAGTCTGGT TTGGAAACAA TTCGCAACAG 
CTTTGAAGAT ACCGTGTCTG AATGGACCGA GACGGTCAAG GACCGATTTG CTACAAGTGT 
TATTGACCAG ATGAGCGCTG CACAGCATAC AGGGGACAGT ATAGTCCAAA AAGATCATTA 
CCTCTATGCT GAACTCGCTC AAGTCGTGAA GGAGGAGTTG GAAAGAGAAA TGAAACCGGA 
GCTACTGAAT CGAATTGATG AGATTATTGT TTTCTCGCCC CTCTCGACGG GCGACCTGTG 
GATGATCGCC GAGTTGATCG TTGCCAAAAT TTCAGAAAGG GCATTAAAGG AACAAAAGCT 
GGAACTGAAG ATTGATCGAT CCGTGATAGA GCGAGTAATG GCCGAAGGAA GCGCCAACGC 
TGACCAGTTT GGTGCTCGTC CCATGCGCCG AGCGGCTCAG CGTTTTGTCG AAGACAGTCT 
GAGTGACGCG ATCATTCAAG GTTTTCTTCA AGAAGGTGAA GGTGCTACCG TCTCTCTCGC 
GTCGAAGGCC TCC 

 

Protein sequence

PFGKDLKRTL VQAGKLADQM GSTTVGSQHV FLALLEYSEG GWAVLVKMNV LDDTVTALDV 
CESLLQNMAD QPDQARRELV TGAGGSGKMP TLTECGVDLT QQAEDGLLDP VYGRDDETRA 
CVRTLIRRRK NNVCLIGEPV GVGKTAIAEG VAQILVDEKL CPARLKGHRL FSLELSNLVA 
GTKYRGEFEE RLQSIIKEVT DPKAPPTILF IDEIHNLVGA GAAEGGMDAA NLLKPALARG 
ELQLIGATTI MEYRKYIEKD AALERRLQPV MVKEPSVVQT IDILQAVQSN YEKHHGVTYT 
SAALNAAATL SDRYMTDRFL PDKALDLLDE AGAIAHLEEP DEDVTPEVTE HTVAMVISEW 
SGIPMGKLET QEMDRLQALE GEMGRRVKGQ GRAIRGVARA VRRARSGLRD PRRPVASFLF 
CGPTGTGKTE LCKTLAETYY GSEKDMIRID MSEYMEKHSV SRLTGPPPGY IGYEEGGQLT 
EAVRRAPHSV VLLDELEKAH GDVLNILLQV MEDGMLTDGK GRTINFKNSI LVMTSNVGSR 
RILEVARSGR DSIVQKDHYL YAELAQVVKE ELEREMKPEL LNRIDEIIVF SPLSTGDLWM 
IAELIVAKIS ERALKEQKLE LKIDRSVIER VMAEGSANAD QFGARPMRRA AQRFVEDSLS 
DAIIQGFLQE GEGATVSLAS KAS