Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16445 |
Symbol | |
ID | 7198766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 389806 |
End bp | 390903 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184872 |
Protein GI | 219129388 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.12539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAGCTCGTG AATACGTTGA TTCGTTGGCC AAACCCATGG GGTCGCTCGG AACATTGGAA GACTGGGCCG CTCGGATTGC CGCTTTGCAG CGTACCCTGG TACCCAGTGT AGCCAACGTT ACATGTCTGA TTTTCGCCGC TGATCACGGT ATGGCCGCTG ACGCCGAACA AGGAGGGGAA GGCTGTTCCT CCTATCCACA AACAGTCACT CGAAGTATTT TAGATGGTTT AAAGCGAGGC GTTGCTGGGG CTTCCGTCCT AGCCCGTGCA AATAAGGTGC ACCTAAAGGT CATTGATTTA GGGGTACTTG ATGCAAAACC GTTACCTGAA AACAATCATT CCATTGATGG AGTTGCCGTC TCAAAGTATA AACTACCGAA CGGGACCAGA AACGCCTGCC AGTGCGCTGC CATGACGCTG GAAGAAACGA ATGGCTGCAT GCAAGAGGGC AAGGACGCTG TGCGGAGCTG CCATTTTCAA GGATGTCAGC TGCTGGTTTT CGGGGAAGTT GGGATCGGTA ACACGACGAC ATCATCGCTG TTGCTGGCAG CCATAATGGG AGGTAGCTGT AGTGCGGCGA GTGTTTGCGA CGGCGGAGCT ACCCTGGGGC GAGCTGTCGA CGAGGCGGCC GTCCAAAAAA AGATCGACAT TGTAGAAAAG GCGCTTTCCT TTCACAGGGA GACACTGCGG ACGGCGGACG TAATGAGCAT ACTGACGCTT GTCGGTGGGG CTGAGATAGC CGCATTGGTG GGAGCCATGC AAGAAGCGTC CAGGCTAGAC GTACCTTTCT TGGTGGACGG CTTTATAGTG ACGGTAGCTG CGTTAGTTGC TGTTTGTCTG AACCCGCAGT GTTGTCGTGG GATGTTATTT GCCAGCCGGT CGCCAGAGCG GGGACAATGG ATAGCGTTAC AGAAAATTCG AGAAATTGCC GTGGAGGGCA ATCTTCCGGT CCCTGCCGAA CCGGCTCTTT CGATGGGACT GCGCATGGGG GAGGGATCTG CTGCGCTCTT GGCAGTCCCA ATTGTGCAAA GTGCAACCGC AATGCTGCGA GAAATGGCAA CGATTCAAGA TATTTTGGGC GGTGGGGATT CGAGGTAA
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Protein sequence | KAREYVDSLA KPMGSLGTLE DWAARIAALQ RTLVPSVANV TCLIFAADHG MAADAEQGGE GCSSYPQTVT RSILDGLKRG VAGASVLARA NKVHLKVIDL GVLDAKPLPE NNHSIDGVAV SKYKLPNGTR NACQCAAMTL EETNGCMQEG KDAVRSCHFQ GCQLLVFGEV GIGNTTTSSL LLAAIMGGSC SAASVCDGGA TLGRAVDEAA VQKKIDIVEK ALSFHRETLR TADVMSILTL VGGAEIAALV GAMQEASRLD VPFLVDGFIV TVAALVAVCL NPQCCRGMLF ASRSPERGQW IALQKIREIA VEGNLPVPAE PALSMGLRMG EGSAALLAVP IVQSATAMLR EMATIQDILG GGDSR
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