Gene PHATRDRAFT_16442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16442 
Symbol 
ID7198722 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp172834 
End bp173751 
Gene Length918 bp 
Protein Length168 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184835 
Protein GI219129311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.746613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTG ATCAATGTCC GGCAATAGCT CCCTTCTTTG GGTTTCTCGG CGTAGCGGCA 
TCGACAGTTT TTGCCAGTGA GTACATTTTT ATTTCCGAGG ATCGCGAGGG AGCACAGTGA
TCGACAATGA GTTTAGATGT GTGTGTATCG GAACGTTTCC AACACAAAGA TCCGTAGCCG
CCAAAGAAGT GGTTTGGAAG GGACTTGGCA CGCACGAAAC GGAAAGAAGT GTATTGGATG
CTTCGTTGGC GCTGTTCCAT AGCTTCGCCT ATTTGCACGG TTTCTGCGGA TCTGTCGCTT
ATTGTGATAG CGCCACGTCC CCGTCTTCCA TGTCGTGTCA TCCGTTCCTC TCACATCAAA
TCTGCTTTTA TGCTTTCTGT GATTTTAGAT ATGGGCGCTG CGTACGGTAC CGGCAAAGCC
GGAACAGGGA TCATGATATC CGGCATTTCC TCACCCGATC TGATATGGAA GAATCTCATT
CCCATTATTA TGGCCGGTGT CAACGGGATA TACGGCCTTA TTACCGCTAT CATTATTATC
AATCAAATCG TGACACCAAC ACAAGATGGT CTCGGCACGT ACAGTTTATA CACCGGCTTT
GCGCATTTGG CTTCTGGATT ATGTTGTGGT CTCTGTGGAC TCGGATCCGG CATGGCCATT
GGACTGGCGG GTGACGCCGG AGTAAGGGGT TGCGGATACT ACGACTTTGA AACCAAAAAA
GTTGTGAAAC AACGAAGCGG CGGTGGACTT GCCGGCGGAG CCACGGCCGG TCGGAAAAAG
AAAAAGGCCG GCGGGGGGGA TCAACTATTC GTCGCCATGG TACTGATTCA AGTCTTTGCC
GGTAATTTGG CACTGTATGG TTTGATCACA TCCATCATTT TGACGCAAAC ATCGTACGTC
TGTGAATACG CCAATTAG
 
Protein sequence
MDFDQCPAIA PFFGFLGVAA STVFANMGAA YGTGKAGTGI MISGISSPDL IWKNLIPIIM 
AGVNGIYGLI TAIIIINQIV TPTQDGLGTY SLYTGFAHLA SGLCCGLCGL GSGMAIGLAG
DAGKKAGGGD QLFVAMVLIQ VFAGNLALYG LITSIILTQT SYVCEYAN