Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16442 |
Symbol | |
ID | 7198722 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 172834 |
End bp | 173751 |
Gene Length | 918 bp |
Protein Length | 168 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184835 |
Protein GI | 219129311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.746613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTG ATCAATGTCC GGCAATAGCT CCCTTCTTTG GGTTTCTCGG CGTAGCGGCA TCGACAGTTT TTGCCAGTGA GTACATTTTT ATTTCCGAGG ATCGCGAGGG AGCACAGTGA TCGACAATGA GTTTAGATGT GTGTGTATCG GAACGTTTCC AACACAAAGA TCCGTAGCCG CCAAAGAAGT GGTTTGGAAG GGACTTGGCA CGCACGAAAC GGAAAGAAGT GTATTGGATG CTTCGTTGGC GCTGTTCCAT AGCTTCGCCT ATTTGCACGG TTTCTGCGGA TCTGTCGCTT ATTGTGATAG CGCCACGTCC CCGTCTTCCA TGTCGTGTCA TCCGTTCCTC TCACATCAAA TCTGCTTTTA TGCTTTCTGT GATTTTAGAT ATGGGCGCTG CGTACGGTAC CGGCAAAGCC GGAACAGGGA TCATGATATC CGGCATTTCC TCACCCGATC TGATATGGAA GAATCTCATT CCCATTATTA TGGCCGGTGT CAACGGGATA TACGGCCTTA TTACCGCTAT CATTATTATC AATCAAATCG TGACACCAAC ACAAGATGGT CTCGGCACGT ACAGTTTATA CACCGGCTTT GCGCATTTGG CTTCTGGATT ATGTTGTGGT CTCTGTGGAC TCGGATCCGG CATGGCCATT GGACTGGCGG GTGACGCCGG AGTAAGGGGT TGCGGATACT ACGACTTTGA AACCAAAAAA GTTGTGAAAC AACGAAGCGG CGGTGGACTT GCCGGCGGAG CCACGGCCGG TCGGAAAAAG AAAAAGGCCG GCGGGGGGGA TCAACTATTC GTCGCCATGG TACTGATTCA AGTCTTTGCC GGTAATTTGG CACTGTATGG TTTGATCACA TCCATCATTT TGACGCAAAC ATCGTACGTC TGTGAATACG CCAATTAG
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Protein sequence | MDFDQCPAIA PFFGFLGVAA STVFANMGAA YGTGKAGTGI MISGISSPDL IWKNLIPIIM AGVNGIYGLI TAIIIINQIV TPTQDGLGTY SLYTGFAHLA SGLCCGLCGL GSGMAIGLAG DAGKKAGGGD QLFVAMVLIQ VFAGNLALYG LITSIILTQT SYVCEYAN
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