| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_16421 |
|---|
| Symbol | |
|---|
| ID | 7198799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011694 |
|---|
| Strand | - |
|---|
| Start bp | 241256 |
|---|
| End bp | 242542 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184926 |
|---|
| Protein GI | 219129501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TATCTGCTGG TGTACCTGCT CGCCACGCTC AGCGACTGGT TGCAGGGACC GTACGTCTAC
GCCCTTTACT CCGATTATGG CTACTCACAG CACGATATTG CCGTCCTCTT TGTGGCCGGC
TTTGGATCCT CCATGGTCTT TGGATCGTTC GTGGGCGGCA TGGCCGATTG GGGCGGACGC
AGGACCTTTG CCGTTCTCTT TGCCGTCGTC TACGCCTGCT CCTGTCTAAC CAAACGTACG
TAGTATGCAC GCACGTGCAT TGTGATGGTC ACACACTCCA TGCTCGTCCA TAGATACTCA
CGTTACCTCC ATTGCTGTGG GAATACAGAC TTTAAAAACT TTAACGTGCT CCTCCTGGGT
CGTTTGTTGG GTGGTGTCTC CACCAGTTTG CTCTTTTCCG TCTTTGAAGC CTGGTTGATT
CGGGCCCACA ACGATGCCGG CCTTAAGGCC TGGTTAGGCA AATCTTTTTC CTGGGCCGCC
TACGGAAATT CCGTCGTTGC CATTACGGCG GGACTCGTCG CCAATAAGGC CGCCAGCGCC
GTGCCCATGA CCGCTATCCA AACCGGCGGA CAAGTGTACA TGGGTGGCTA CCTGAATCCG
TTCGATATTG CGCTCGTGGC CTTGCTGGGA TGCGGCATAG CTGCACTGTC TCTGTGGGAA
GAAAACTACG GAGATACGGA CGGATCCAAC GATAGCAGTC GTGGCCAAGC CCACTGGTAC
GATGGTCTCC AGACCGCCTT TACCACCACC ATTCGCTCGC AAGATGTCTT GCTCTGTGGC
ATTATTTCTT CGCTCTTTGA AGGTAGCATG TACATCTTTG TCTTTATGTG GACACCAGCC
TTAACGGAAG GATCCGATGA AGCCTTGCCC TTTGGACTCA TCTTTTCAAC CTTTATGGTC
TCCTGCATGG CCGGCTCGAG CTTGTTCTCT ATACAGATTG AAAAAATGCG GGGCGAGCGT
CTCGCCGTCA TTGTGTTTGC CACGGCCTCC GCCGCCATGG CCGGAATCGC CCTGTCCTAT
TCCAATACCG TCAAGTTTTT GCTCATGAAC GTCTTTGAAG TCACCGTCGG CATGTACTGG
CCGATTTACG GAACCCTCAA GGGCGTCATC GTGCCGGAGT CCAAGCGGGC CGCCATTTAC
AATCTCTACC GTATCCCACT CAACTTTATC GTCCTGTTCT CCCTCTTGAC CGATTTAACC
CCCACGACGA GCTTTTTGTT GAACGCCACC ATGCTGGGAA CCGCTGCGGT GTTGCAGATT
ATCCTCATGA AGCGCCGCGA AATGCAC
|
|---|
| Protein sequence | YLLVYLLATL SDWLQGPYVY ALYSDYGYSQ HDIAVLFVAG FGSSMVFGSF VGGMADWGGR
RTFAVLFAVV YACSCLTKHF KNFNVLLLGR LLGGVSTSLL FSVFEAWLIR AHNDAGLKAW
LGKSFSWAAY GNSVVAITAG LVANKAASAV PMTAIQTGGQ VYMGGYLNPF DIALVALLGC
GIAALSLWEE NYGDTDGSND SSRGQAHWYD GLQTAFTTTI RSQDVLLCGI ISSLFEGSMY
IFVFMWTPAL TEGSDEALPF GLIFSTFMVS CMAGSSLFSI QIEKMRGERL AVIVFATASA
AMAGIALSYS NTVKFLLMNV FEVTVGMYWP IYGTLKGVIV PESKRAAIYN LYRIPLNFIV
LFSLLTDLTP TTSFLLNATM LGTAAVLQII LMKRREMH
|
|---|
| |