Gene PHATRDRAFT_49918 details

Gene Information

• Locus tag: PHATRDRAFT_49918
• ID: 7198617
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 285501
• End bp: 287721
• Gene Length: 2221 bp
• Protein Length: 652 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184771
• Protein GI: 219129175

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGGC AAAGTCTGAT CAGTAGATGC CAAGCCTTTG CTCCGCCTCC CACAGTTGAC 
ACGAATGATG ACTGGATGCC AGTCGACGCC TATCGTCAAC AACACGGTAT TCAGTTCGAA 
TACGAACCGA GGCACATCTC CCCCGAAGTT TGCCGGTACT TAAACGAAAC AGAATGTGCT 
CAAGAAGACA AAGCTGCCAG GGAAACGTAC CAGCGCCATT TGCGAACAAT GGAAAGCCTC 
CGACGAAGAC GTTTACAGAC TACCCCCGCA ACCAGCAAGG GCTCGTTCAA GGCTATGGTA 
CTTCTTGTCC AGTTTGCGGA CCACCAAAAC CGGCCCCTTC CCTCGAAAGA ATACTTCGAA 
GAGCTCTGCA ACGGTGCCGG AACGTCGACG GTCAACCCTA TCGGTAGCAT AAAGTCCTAT 
TTTTCCGAAC AATCGCAAGG CTTGTATGAT GTTGATTGCG AAGTTTTTGA TTGGCGCACC 
ACAACGTATA CCGAAGCGGA CGCTGCACAA GGTATTAGCG GTATATTGAG CAACGCCAAC 
GCCCAAAAGT TTTTCCACCC AGTATTGGAT CAGATTGACG CAGAAAAAGT CGCCTCGAGT 
GGAGACTTTT GGTTATTTTT CGAAGGCTTC GATGCCGATG GCGAAGACGG TATGGGCGAC 
GGCTTCATTG ATGCATTGGT CGTGATTCAT TCTGGTTTTG GAGCACAAGT GGCAGAAATT 
TGCGACGGTG TTCGACGTGC CGATCGGATC TGGTCACAGG GTCGCTCCAC TTCGGAAGGC 
TTTGGTTGGA ATCCACGCAA TATTGAGGTC GGTTCCTACT CTATTGCCAG TGCATTCGAG 
CGTTGCAGTA CAGACCGCCC AGCTTTGATG GGAGTCATTA CTCACGAATG GTATGGTCAG 
ATCGCCTTCC TTTTCGCGGA AATTTTGTCA TTCTTCGTTG GAACTAACCG GTCGTCATTT 
ATGATCTCAG GCTTCACACT TTCGGCGTAC CAGACTTGTA CGGAAAAAAC AATTTTCGAT 
TCGGTGGTAT TGGGTCCTTT GGAATGATGT CATCCCCGTA TGGCCAGACT GGCGACGGGT 
CCACGCCTGG ATCGCTAGTA CCATGGACTC GAAACCGCAT TGGTTGGCTG GAATACAACG 
AAATTACGAC GGATGGGACG TATTCAGTAA GTGGGCTGCA GGCGTACGCA ATTCGTGATA 
AGTTCCCCGC AGATGAGTTT TTGGTGATCG AATGCCGGTT TCCAAGCTCT TTCGATTCAG 
ACTTCTGGGG AATCGGTGGC ATTGTATTTT ATCATATCGA CGATAAAATG GGAGGACAAG 
ACCGCCCAGG CTGGCCCGGT CAATCTGGAT GGCCTGCAAA CGGCAACCAC TACCAAGTAG 
CAGTACTACA GGCTGATGGA CGTTACGACA TCGAGCAAGA TGTCAACAGT GGAGATATCG 
ATGATCTGTG GGTGGATGGG ATGGCTTTAC GCCCAAATGG TGGGAGCGGT ATTTTCCCTA 
ATACCGATAG TTATCAGGGA ACGCCAACGG TGACAGGGAT CACAATCCGA ATCGTGTCCA 
GCCCGGGGAA GACTATGCAG TTTGTTGTAG AAGGACTGGC ATCCAATCCC AACCAATTAT 
CACTTCCTAC GCCCTTCCCA AGTGGCCTTC CTTCACACTC TCCGGTCATT GGGATTGCTG 
CTACTCCCTT CGCGTCTCCA TCACAGTCAA ATCCCTATCC ACTCTGTACG TCGAGTATTA 
CAGAAAATTG CTTTGATCAA CCCACAGCAG CTCCGAAAGA TTCCAAACCT TGTGTACCAG 
GCATGGGAGT GGTCTGTTCT GATGGTACTA GCGATCCACA AACGGCCCCG ACTATAGCAC 
CTGAAAGTTC CAAAGATGAA ACAACAGGAC AAGAAGATGC TTTGACTTCC AGTGCCCCAA 
AGCTTGGCGA TATGCTTGTT CTGGTTGTCT CTGCTGTAAC CATCGTGGTT ACTTGGTAAA 
GGGGGAAGGC TAGCTTAAAC GGGGCATTTT TGCATCTTTC ATCAAATCTT CAATGACCAG 
AAGGATCTCC CGTTGGTTTT TGTCCGAAGG CTTTACTCTT TCGATTTAAA CCTGAAGATG 
CATTCTTTCG GACCAATGGT TAACATCTTG GTTTGTCTGG TCTTCTCGCT CTCTCTAGAA 
TTCATGTGAG CTCAAAATAG CACGAGCCTC AACTGTAAAG TAAATTTGAG TCGAAACCTT 
G 

 

Protein sequence

MAGQSLISRC QAFAPPPTVD TNDDWMPVDA YRQQHGIQFE YEPRHISPEV CRYLNETECA 
QEDKAARETY QRHLRTMESL RRRRLQTTPA TSKGSFKAMV LLVQFADHQN RPLPSKEYFE 
ELCNGAGTST VNPIGSIKSY FSEQSQGLYD VDCEVFDWRT TTYTEADAAQ GISGILSNAN 
AQKFFHPVLD QIDAEKVASS GDFWLFFEGF DADGEDGMGD GFIDALVVIH SGFGAQVAEI 
CDGVRRADRI WSQGRSTSEG FGWNPRNIEV GSYSIASAFE RCSTDRPALM GVITHEWYGQ 
IAFLFAEILS FFVGTNRLHT FGVPDLYGKN NFRFGGIGSF GMMSSPYGQT GDGSTPGSLV 
PWTRNRIGWL EYNEITTDGT YSVSGLQAYA IRDKFPADEF LVIECRFPSS FDSDFWGIGG 
IVFYHIDDKM GGQDRPGWPG QSGWPANGNH YQVAVLQADG RYDIEQDVNS GDIDDLWVDG 
MALRPNGGSG IFPNTDSYQG TPTVTGITIR IVSSPGKTMQ FVVEGLASNP NQLSLPTPFP 
SGLPSHSPVI GIAATPFASP SQSNPYPLCT SSITENCFDQ PTAAPKDSKP CVPGMGVVCS 
DGTSDPQTAP TIAPESSKDE TTGQEDALTS SAPKLGDMLV LVVSAVTIVV TW