| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49878 |
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| Symbol | |
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| ID | 7198594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | + |
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| Start bp | 171242 |
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| End bp | 172996 |
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| Gene Length | 1755 bp |
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| Protein Length | 533 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184664 |
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| Protein GI | 219128952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0245361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGATCTTATC CCTTCTGCGA AAGACTTTCA CGTTCGTACC AGCGAACACA GCACGGAGAT
TTCGTATTTG AAAAAAACGT ATGGACCAGA AGGCAACAAA CATAGTTTGA CATTGTTCGT
GTTGCTCACT TGGAGAGATC ATACCGCACT GCAATGAAAG ACAGAGCCAT GCCTTCCTTC
CGTTTGCCTC TACTTATGCT TTTGTCCCTT TACTTTCCTA TGGATATACT CTCAAAGACT
GATCTATCAA GCTGTATGGA AGCTATGCAA CTAGCCGATC AAAACAGAGA CGGTCTTATT
TCCAGATCCG AGTACGTCAA CCTCATGACG ACCCTGAGTC CGTACGAGTC ATGTCCAGAT
TCTCGCCTCG GCGGCGACCT TTTAGGAAAC GGCTCCTTCC ATTTGGCGTT TTCGTCTTTG
GCTTGCCTCT GTCTGCGCTA CACGAATGAT CGGAATTGTT GTACAGAAGC GGGGGAAGAA
AACGGCACCG GTCCCGTTCT CGTGTTGGGG AACGTGTACC CCAAAGCCTA TACCGAGCGC
GTTTGTGCGA CGCTCGCCGG TACGCTCGAC GATGAATGTG CCCCTCCACC AACTTTGTCG
CCTGCAGTGT TACTTTTGGA AACACCCGTT ACCGCAGCGG CGGCACCTAC TGCGGGTCGA
CCAGAAGCCT CTCAACCACC GACTGTAAGT CCCAACTTTC GTCCGTCATC CAACCCGACT
GCACCACCAA GGGAATCGAT TTTACCTACA CCAACGAGTC TATTCAATAG TGGAGGGGTT
GAGGACGGAG GCAACAATGG CTCCCTGGTT GATGCGAACA CAGACGACCC TAATCGAGGA
CTGACCATAG CCTTGCCCAT TGTGCTCCTT TTGACACTCA TCGGCACGCT TGCCTTTTGG
GCAAACCGGC GGCGTTCACG TGCGCGCGAT CGTGAGTTCA GCTCTCTGGC GTTGGGTTAT
TGGAACAAGG GACGCGGTAC GGGTGGCGAA CAACCATCGC CGTCCGACAA TTTCGACAAT
CGTACGACCT GTACAAAATC AATCGAAACG CCAGGATGCG TGTGGGTCTC TGAGTTAAAA
CTCCCATTGT CCTTGGAAAT GCATACGCCA CAGCGTTCTG TTAACCTACA GAATAGTTTT
GAAATGAATC ACAGGGGCAT CGATGCAAAA ACCCAGGTTT CTTTAGGTTC CCTTGGCGTA
TACGAATCAG GAAGCGAAAC CAGTACCGGT GTGGTTGTGG TCGGGGAGTT GGCGCATCCC
AAAATCCGGC GAGATCGGGA ATTTTCATCT CCCTTGGAAA GCGAGGGGTC GGAGATTGAC
GAGGAATTTT TATCGGAACA GGACGTTGAC GAAATTTCCT CGCTGGCGAC AACGTCAGAC
GATTACGATT GTGATTCAAA TTACACTCTG TATCGAGCAT GTGATGCCGT TCCCGAGAAG
AACCAGAACG ATTCGTATAC GCCAGGGGAT AAGGCTAAGC AGACGCCGCC CCCTCATGGT
GTGAGTAGGC AGCGGCGTCC TTCCGCAATC CCAACCGTTG GTATTGCGAC GAGCCCGATT
GTACTAGTCA ACACAACGCT GCATGCGGCA GCAACGGAAT ACCCAGACCA AGGTCCAACA
CCTGCGTTCC AATACGCGGA AGAGGGAAAT GACAGTGACT CGCAAGCAGA TTTTTCGTTC
CTCGATTACA GTCTGAAGCA AGCCGCGTGG CTAGACTTTC AGCCCGGTGC GGCACCAGAA
GAAGGTCTGC CGTAA
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| Protein sequence | MKDRAMPSFR LPLLMLLSLY FPMDILSKTD LSSCMEAMQL ADQNRDGLIS RSEYVNLMTT
LSPYESCPDS RLGGDLLGNG SFHLAFSSLA CLCLRYTNDR NCCTEAGEEN GTGPVLVLGN
VYPKAYTERV CATLAGTLDD ECAPPPTLSP AVLLLETPVT AAAAPTAGRP EASQPPTVSP
NFRPSSNPTA PPRESILPTP TSLFNSGGVE DGGNNGSLVD ANTDDPNRGL TIALPIVLLL
TLIGTLAFWA NRRRSRARDR EFSSLALGYW NKGRGTGGEQ PSPSDNFDNR TTCTKSIETP
GCVWVSELKL PLSLEMHTPQ RSVNLQNSFE MNHRGIDAKT QVSLGSLGVY ESGSETSTGV
VVVGELAHPK IRRDREFSSP LESEGSEIDE EFLSEQDVDE ISSLATTSDD YDCDSNYTLY
RACDAVPEKN QNDSYTPGDK AKQTPPPHGV SRQRRPSAIP TVGIATSPIV LVNTTLHAAA
TEYPDQGPTP AFQYAEEGND SDSQADFSFL DYSLKQAAWL DFQPGAAPEE GLP
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