Gene PHATRDRAFT_49867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49867 
Symbol 
ID7198500 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp132980 
End bp134277 
Gene Length1298 bp 
Protein Length248 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184740 
Protein GI219129110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.668859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACACAACGA GTCCATTGAC CAGTAATTGG AAACTACGAA CGCTCTTTCT GGTCCCCCAC 
ATCACCCAAC AACACATCAC CAACTGCCTA ACTCGGAATT CGTTTTCCTT GACTTTCGTA
CCAGCTTTGT CTTTTTCTCC CATTGCCTGC CGCACGATGT TCGCCGAAGA AGATTCCTGC
CTAGCCTACA ATGGCGAGGG TATAGCCTAC CAAGAATTCA CTTGTGTTCA TCCCGAACTG
GATCGATTCT ACTTGTCGTA AGTCACGCTA TCGACCCCCC TACACACTGA GCTATATACG
TACATCCACA CACACACACA CACATATATA TACCGTCGCA TACTCACGAT TCCTTGGTCT
CACACTTGAC ACGTTTGGTC TGGATGTCTC GTTCCTCCCT GGCAGTGTGG AAAAGTACTA
CGACCCGATT CCGGTGTCGC AATGGATGGA AGCGCATCCG TTGGTTCCCA TTGGCGCCTG
CCTACTCTAC GGACTCTTGA TGGTGGCGGG ACAGGCCTAC TTTCGCACAC GCGAACCACT
CCGGGCGCGG ACCTCCCTCG CGGCCTGGAA TCTCTTTCTG GCCCTCTTTT CCCTCGTCGG
CATGCTCCGG ACCTTTCCCC AGCTTGTACA CAACCTCGCG ACGCTCACGC TCCGGGAAAA
TCTCTGCGCC AATCCGCAAG CCACCTACGG ATCCGGATCC ACCGGATTGT GGGTACAACT
CTTTATTCTG TCCAAATTCC CGTACGTTTC TTTTTGCCAG ACATGTGTGG GGCGGTGGTG
GACTCACATA TATACATACA CACACACACA GATACTGACA CTTGCTGGCC TTTATACCCC
TTTCCAGTGA ACTCATTGAT ACAGTATTCA TCATTGTCAA CAAGAAGAAA CTCATCTTCT
TACACTGGTA CCATCACATT ACGGTCCTCC TCTACTGCTG GCACAGTTAC GTCACCAAAT
CCCCGCCGGG AATTTTCTTT GTCGTCATGA ACTACACCGT CCACGCCTCC ATGTACGGAT
ACTACTTTCT CATGGCCATC CGAGCCCGAC CCCGTTGGCT CAATCCCATG ATTGTCACGA
CTATGCAAAT ATCGCAAATG GTCGTGGGCG TCGCCGTCAC CCTCCTTGGC TTTTACTACT
CGGCACGTGC CGCCGACCAC CAATCCTGTC GAATTAAACG GGAAAACAAC ACCGCCGCCT
TTGTCATGTA CGGATCCTAT CTATTTCTCT TTCTGCAGTT CTTTGTGGGA CGCTACGTTG
GCACCCAATC CCCAGTCGCG TCCAAAAAGA CGGCCTAA
 
Protein sequence
MEAHPLVPIG ACLLYGLLMV AGQAYFRTRE PLRARTSLAA WNLFLALFSL VGMLRTFPQL 
VHNLATLTLR ENLCANPQAT YGSGSTGLWV QLFILSKFPE LIDTVFIIVN KKKLIFLHWY
HHITVLLYCW HSYVTKSPPG IFFVVMNYTV HASMYGYYFL MAIRARPRWL NPMIVTTMQI
SQMVVGVAVT LLGFYYSARA ADHQSCRIKR ENNTAAFVMY GSYLFLFLQF FVGRYVGTQS
PVASKKTA