Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49867 |
Symbol | |
ID | 7198500 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 132980 |
End bp | 134277 |
Gene Length | 1298 bp |
Protein Length | 248 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184740 |
Protein GI | 219129110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.668859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACACAACGA GTCCATTGAC CAGTAATTGG AAACTACGAA CGCTCTTTCT GGTCCCCCAC ATCACCCAAC AACACATCAC CAACTGCCTA ACTCGGAATT CGTTTTCCTT GACTTTCGTA CCAGCTTTGT CTTTTTCTCC CATTGCCTGC CGCACGATGT TCGCCGAAGA AGATTCCTGC CTAGCCTACA ATGGCGAGGG TATAGCCTAC CAAGAATTCA CTTGTGTTCA TCCCGAACTG GATCGATTCT ACTTGTCGTA AGTCACGCTA TCGACCCCCC TACACACTGA GCTATATACG TACATCCACA CACACACACA CACATATATA TACCGTCGCA TACTCACGAT TCCTTGGTCT CACACTTGAC ACGTTTGGTC TGGATGTCTC GTTCCTCCCT GGCAGTGTGG AAAAGTACTA CGACCCGATT CCGGTGTCGC AATGGATGGA AGCGCATCCG TTGGTTCCCA TTGGCGCCTG CCTACTCTAC GGACTCTTGA TGGTGGCGGG ACAGGCCTAC TTTCGCACAC GCGAACCACT CCGGGCGCGG ACCTCCCTCG CGGCCTGGAA TCTCTTTCTG GCCCTCTTTT CCCTCGTCGG CATGCTCCGG ACCTTTCCCC AGCTTGTACA CAACCTCGCG ACGCTCACGC TCCGGGAAAA TCTCTGCGCC AATCCGCAAG CCACCTACGG ATCCGGATCC ACCGGATTGT GGGTACAACT CTTTATTCTG TCCAAATTCC CGTACGTTTC TTTTTGCCAG ACATGTGTGG GGCGGTGGTG GACTCACATA TATACATACA CACACACACA GATACTGACA CTTGCTGGCC TTTATACCCC TTTCCAGTGA ACTCATTGAT ACAGTATTCA TCATTGTCAA CAAGAAGAAA CTCATCTTCT TACACTGGTA CCATCACATT ACGGTCCTCC TCTACTGCTG GCACAGTTAC GTCACCAAAT CCCCGCCGGG AATTTTCTTT GTCGTCATGA ACTACACCGT CCACGCCTCC ATGTACGGAT ACTACTTTCT CATGGCCATC CGAGCCCGAC CCCGTTGGCT CAATCCCATG ATTGTCACGA CTATGCAAAT ATCGCAAATG GTCGTGGGCG TCGCCGTCAC CCTCCTTGGC TTTTACTACT CGGCACGTGC CGCCGACCAC CAATCCTGTC GAATTAAACG GGAAAACAAC ACCGCCGCCT TTGTCATGTA CGGATCCTAT CTATTTCTCT TTCTGCAGTT CTTTGTGGGA CGCTACGTTG GCACCCAATC CCCAGTCGCG TCCAAAAAGA CGGCCTAA
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Protein sequence | MEAHPLVPIG ACLLYGLLMV AGQAYFRTRE PLRARTSLAA WNLFLALFSL VGMLRTFPQL VHNLATLTLR ENLCANPQAT YGSGSTGLWV QLFILSKFPE LIDTVFIIVN KKKLIFLHWY HHITVLLYCW HSYVTKSPPG IFFVVMNYTV HASMYGYYFL MAIRARPRWL NPMIVTTMQI SQMVVGVAVT LLGFYYSARA ADHQSCRIKR ENNTAAFVMY GSYLFLFLQF FVGRYVGTQS PVASKKTA
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