| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49860 |
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| Symbol | |
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| ID | 7198583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | + |
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| Start bp | 114580 |
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| End bp | 116859 |
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| Gene Length | 2280 bp |
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| Protein Length | 586 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184649 |
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| Protein GI | 219128920 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0505855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAATTTACTC TGACTGTGAA GTAATACTTG TACATATCAT ACAATACAGT GTTTAGGGAT
GAGGTCAGTG GGAAAGAAGC TTAGACTTCG AAACAAATCC TTAGCAGCGA ATTCCTTGGA
AGATTATTGT GTGAGCGCGA TGCTCTTCCT GGCTTCCACC TCTCGTTCAA AGGGAAGGAA
CTTCAAAAGC AGGCACCAAC AATATTCCTC AACCACCCTA GCGACACAAG CGTCACAAAA
GGTTCTGCTT CACGATGGGT TCTGAAATTT GTGTTCACTG TTTTTGTTAA CTCCTCCTGA
GTATTAGTGC TTTCAAGCCA TCCCCCAAGA GCAAAATCAA CCAGATGTCG TACCATCTCT
CCAACTATAA TATGTGACAT CGAATTCGAA CGCCGAATAA GTCGGGGCGA CTCGTATTTG
GCGAATCGAA AACACTTTCC TCGACTTGTT GACAGTGAGT TCTGTCGTTG TTTGCGGTAG
ACTAACTGTA AGTCGGCTTT GTTGATTTGG TATTTGACGA TGACACAACA TCAAAAGGAA
CGGGGACCGC TCCATTCTAC TCGCTTAGGA CGCGTCCAAC CACCGGCTAG AGTACCTCCA
CGAGACTTTT CCCTTGTTGT CATCGACACG TGGTTACTTT GTAGAGCGAA CGGAGCGTCA
ACGGACGCAA CGACTAAGCG CAACAACACC ACGTCGTCGC TGTCATCCCG GGCCTCCGCG
GTTGACCCTA ACGCTACTAC TGCCGACCCA TACAAAGTCT ATCTTTGTGT CGCGTCCTGT
TGGAGTGCCA TAACGTGTAC GGGAAGTGGT CTCGATCAAG TGTGTGTCAC CAACAGTCAT
CCCTACACAT CTCCGCCTCC ACCGTGCACC GACAGGATGA GCGGTGACAT TCCTGGGCCA
ATTTCCCACG GCAGTTCCGC TGACGGTACC AGCAGTACGT CACACTTTTC ATCCCCGCAC
AAGGCGCAAC AAATGGCACA AAATTTCGCC CAATCCGCCT CCAAAACACT GCAATCGTGG
ACGACACGAA AGTACACTCT ACCGGATAAG AATGTTGCCT CGCAAGTGCT CATGTACCGG
CAATTGCTCC ACACTCAATG CCGCGTCGGC CTTAAGCTTT CCCGTCCCTA CCAAGGCACC
CCCGCACAAG TCGCCGTTAA GGATATGCCC TGGTGGAATC CGGGGATGTT GGAAAGCCTG
CAAATGATCA TTAGCTACGA CAATCTCGTT CAACGACTGT GGCTCGGTGG TGCCATTGAA
CCCTTTGCTG TACGCGACGG CCGTGGGATA GACAGCGACG TCGAAACATA CTTAGACGAG
GCCGGTATGC CCCCAATTCC TCATGACTTT TGGGTTCACC GCGTAGGCTT TCAACAGCCG
GATCCCGTGA CGGACTTTCG ATCTGGCGGA ATTCTCTCCT TGGCTCTCAT GGTGCACATT
GTGGAGTCGT GTCCGCACAT TCACCAGCGC TTTACCCATG GCGACGCTTC GGTCCTACCT
TTTGGTATCA CCAGCATCAA CGTCACGGAT ATGATGGCGG GATTTCTCAT GTTGGCCAAA
AAGGTAGACC GCATGGATGC TTTGCTGTCG CAAAAACCGT TTTGGCGCAT GTTTGCCGAT
CCACACTCCT TGCTCGCCTG TCAAGAATTG GCGCTCGACA TTCTGGCCGA CGTTGTGGTG
GAACTGCAGA AAACCCGAGA AGCGACGGAA ACGTCGGAAC GAGTCAAAGT TACCGTCTTT
GATTTTGCCT GGATTCTGGA ACAAACTACG CACCGTGTGG AACACGATCT GCTGGGTGCC
GGTCCCAAAA GCGTACCCGA ATTGCGGGCC ATCTATGGCC GACTCAAGGC ATCCTACCAG
GTCGCGTTGC AAGCCAAGAT TGATCCGGAT GCAGCCACGA GAAGTCCAGT GAATGCAACG
GCGACCAATG CGCGTCGCGC CTTTTCACCC CAGGTCACAT CCTCCTTGGC CGGTGCGGCC
CAGTTGGCTG GTGGTGTCTG GAACCGGTTC AAAAGCAACC CCGCAGAGGT ATCATCAACG
AATACCACTC CCGTGACCCA GCCTACCGCT GTGGCCATTC CGCCGACGGC TTCCGGAACG
CCACGGAATC AAGTTTCCAG CAGTCTTTCT ACAGGGCCGA CTGACGGATC CGCTCCGGAA
GTCGATTCGA CCGAACCGGA TGACTCGGAT TGGGTTGGAA CCGACATTCG GTCCGTCACG
GATGGAGTGG AAAATTTTAG TATAACCGAT GATGACGAAG AAGATAACGA CATGCTATAG
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| Protein sequence | MTQHQKERGP LHSTRLGRVQ PPARVPPRDF SLVVIDTWLL CRANGASTDA TTKRNNTTSS
LSSRASAVDP NATTADPYKV YLCVASCWSA ITCTGSGLDQ VCVTNSHPYT SPPPPCTDRM
SGDIPGPISH GSSADGTSST SHFSSPHKAQ QMAQNFAQSA SKTLQSWTTR KYTLPDKNVA
SQVLMYRQLL HTQCRVGLKL SRPYQGTPAQ VAVKDMPWWN PGMLESLQMI ISYDNLVQRL
WLGGAIEPFA VRDGRGIDSD VETYLDEAGM PPIPHDFWVH RVGFQQPDPV TDFRSGGILS
LALMVHIVES CPHIHQRFTH GDASVLPFGI TSINVTDMMA GFLMLAKKVD RMDALLSQKP
FWRMFADPHS LLACQELALD ILADVVVELQ KTREATETSE RVKVTVFDFA WILEQTTHRV
EHDLLGAGPK SVPELRAIYG RLKASYQVAL QAKIDPDAAT RSPVNATATN ARRAFSPQVT
SSLAGAAQLA GGVWNRFKSN PAEVSSTNTT PVTQPTAVAI PPTASGTPRN QVSSSLSTGP
TDGSAPEVDS TEPDDSDWVG TDIRSVTDGV ENFSITDDDE EDNDML
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