Gene PHATRDRAFT_49857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49857 
Symbol 
ID7198494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp103000 
End bp103923 
Gene Length924 bp 
Protein Length215 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184734 
Protein GI219129098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA TCACGCTCGC TTTACTCTCC TGGAATCTGT GGCTGGCGCC AAACACCGTC 
GTCGCCGACG GCACCGAAAT TGTCCTGGAA TCCTTCGACG ACCCCGTACA CCACTGGAAG
CAAATGAATG ATCCCGTCAT GGGAGGTCGC TCCACCGGAA GCTTCCAGAT TAACGATGGG
GTGGGATACT TTGAAGGACA AGTCGTGGAC GTGCCCTTTC TACACGCGCC GGGATTCATT
CAGGTGCGCA CCGTGGACCG ACACGTCTTT CCGGATGTTT CCACCTGTTC GGGTCTGCAG
CTCACCCTGC GGGCGCACGT ACCGTACACG GGCTACCGCG TTAGTTTCGG CCAGGCCCAC
GCACCGGGTG GCAAGCGCTA CGCGTACGGA TACAAGGCTA CCCTGGAAAA CGTACCGGTG
GGCGAGTTCG GAACCGTCAA CGTGCCGTTT ACGGACTTTA CCGATTTTTG GGACGACGCC
ACGGGAGATC CTATTCGTAC TTGTCAAGAG AATGACTTGT ATTGCCCCGA CGAGCTGACA
CTTCGAAATA TGATGACGCT CGCTCTCTGG GGTGAGGGTG TGGCGGGGAC CGTGTCGCTT
CAAGTCCAGT CGATTGTGGC GGTGGGTTGT TCCGCGGGTA ATGAGTGAGC GTAGCTGTAC
TTCGAAATAA AACGCGGCAA TCTAGCGAAT CGCGAGTCGT AAGAAAGGTC CTCTAATTTG
CCTTAATGTC CTACGGAATA CTTGGTAGTG GCAGCATCCG TTCAAATCTT TGTCGTTGAG
CGGCGCAAGT CTACTGTTGA CGGTAGCCAA ACAAATAGAT CAAGAAATTA TCTTTTTTTC
TGAACGTAAC AAGGCTTTTC AGGTATGGTA ATCTTCTTTT GATAAATCTA GTCGTAAAAC
GCATAGCTTA CAATCATAAT GCTA
 
Protein sequence
MKAITLALLS WNLWLAPNTV VADGTEIVLE SFDDPVHHWK QMNDPVMGGR STGSFQINDG 
VGYFEGQVVD VPFLHAPGFI QVRTVDRHVF PDVSTCSGLQ LTLRAHVPYT GYRVSFGQAH
APGGKRYAYG YKATLENVPV GEFGTVNVPF TDFTDFWDDA TGDPIRTCQE NDLYCPDELT
LRNMMTLALW GEGVAGTVSL QVQSIVAVGC SAGNE