Gene PHATRDRAFT_49850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49850 
Symbol 
ID7198672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp88620 
End bp89323 
Gene Length704 bp 
Protein Length190 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184731 
Protein GI219129091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.788442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTTCTCGA CGTTTGTCTC GTTCCGGACT ACGACCATGA TACGGAGACA ACGGAGTGTT 
AGCATGAAAC TTATTATTAC GGTAGCACAT TCGCTAAGTT TGGTGCTAGT AACTTGCTTG
TTGGCAAGGT CCGTAGCGTT CACGGCTCCG AGTCGCCCCG TGAGCGTCCC CCGCACGGTG
GAACATGCTC GGTTCGGGGC TGTGCCGGTA TCATCCGTGA TGGCTCGTCA CCGATCCGCA
CGACATCCTA TGTTTATGAC GGAGGATGCG CCAGAAGCGC AGCGGGAAGA AACGATTCCC
GCGACTTCTC CCCAAGCCGT CCGGCAAAAG GTCGCCGCCG AAAAGGAAAA GAGCGGTCTT
GCCAAGGCCG TCCTCCTCGC GGTCCCGCTC TTTTGCAAGT TTGTCATTGT GTTGTGTATC
AAATTTTTAA CCGATCTCGT CGTCTTTCCT CTTTTGTGGA CCTATCGGTT GGCACGCCTG
ACAAAAAAGA AGATTCTCGG ACTCTTTGGG AAACGATCCA GCCCCTTTGA TGGCGCCAAC
GGAGACGTAC AGGGGAATAA GGACGCTCCC AACCAAGCCC TGCCACCGAA AATGTCGAAA
GGGTTGTAGT AGACATTTTT TGTGGAAATG AGGACCAGGA TTGGGTGCCG AGCCGTGTTA
TATATGGAAT ACAATCACTA TAAGTTTCAA TTTCCTTTCG CTCT
 
Protein sequence
MIRRQRSVSM KLIITVAHSL SLVLVTCLLA RSVAFTAPSR PVSVPRTVEH ARFGAVPVSS 
VMARHRSARH PMFMTEDAPE AQREETIPAT SPQAVRQKVA AEKEKSGLAK AVLLAVPLFC
KFVIVLCIKF LTDLVVFPLL WTYRLARLTK KKILGLFGKR SSPFDGANGD VQGNKDAPNQ
ALPPKMSKGL