Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49850 |
Symbol | |
ID | 7198672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 88620 |
End bp | 89323 |
Gene Length | 704 bp |
Protein Length | 190 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184731 |
Protein GI | 219129091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.788442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTTTCTCGA CGTTTGTCTC GTTCCGGACT ACGACCATGA TACGGAGACA ACGGAGTGTT AGCATGAAAC TTATTATTAC GGTAGCACAT TCGCTAAGTT TGGTGCTAGT AACTTGCTTG TTGGCAAGGT CCGTAGCGTT CACGGCTCCG AGTCGCCCCG TGAGCGTCCC CCGCACGGTG GAACATGCTC GGTTCGGGGC TGTGCCGGTA TCATCCGTGA TGGCTCGTCA CCGATCCGCA CGACATCCTA TGTTTATGAC GGAGGATGCG CCAGAAGCGC AGCGGGAAGA AACGATTCCC GCGACTTCTC CCCAAGCCGT CCGGCAAAAG GTCGCCGCCG AAAAGGAAAA GAGCGGTCTT GCCAAGGCCG TCCTCCTCGC GGTCCCGCTC TTTTGCAAGT TTGTCATTGT GTTGTGTATC AAATTTTTAA CCGATCTCGT CGTCTTTCCT CTTTTGTGGA CCTATCGGTT GGCACGCCTG ACAAAAAAGA AGATTCTCGG ACTCTTTGGG AAACGATCCA GCCCCTTTGA TGGCGCCAAC GGAGACGTAC AGGGGAATAA GGACGCTCCC AACCAAGCCC TGCCACCGAA AATGTCGAAA GGGTTGTAGT AGACATTTTT TGTGGAAATG AGGACCAGGA TTGGGTGCCG AGCCGTGTTA TATATGGAAT ACAATCACTA TAAGTTTCAA TTTCCTTTCG CTCT
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Protein sequence | MIRRQRSVSM KLIITVAHSL SLVLVTCLLA RSVAFTAPSR PVSVPRTVEH ARFGAVPVSS VMARHRSARH PMFMTEDAPE AQREETIPAT SPQAVRQKVA AEKEKSGLAK AVLLAVPLFC KFVIVLCIKF LTDLVVFPLL WTYRLARLTK KKILGLFGKR SSPFDGANGD VQGNKDAPNQ ALPPKMSKGL
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