Gene PHATRDRAFT_49844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49844 
Symbol 
ID7198574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp74084 
End bp75162 
Gene Length1079 bp 
Protein Length255 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184728 
Protein GI219129085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCTGTTAGT TTCTTCCAAC TTCCGTTCAC GCGCGGGGAG AGAGTTCATG GACGTCGCCA 
CGCCGGGAGG ATTCGGTCCG TAGACCTCAT TCGTTTCCGA AGCGACCCAA CCGGTAATCA
CGACTCGATT CACGGTCAAT CCGGTGGTCG ATTGTTCCAG TGCCAAGTCC CCGAATCCCC
TCTTTGGGCG TCGATGATCC TCTACGAACG CCCGCACCCG CGAATCTCGC CGCCCAGCAC
CGTTGCACAA AAAGCAAGTT GCGTGAGAAA TATCCCGAAA TATATATCCG TAAAGATATC
CGTAAATTAG TATGACCGAA ACACGCAAAG CATTCGTTGT GGGAGGCACC GGAGGCGTCG
GATCCATTTT GATCGATGAA TTGATCCAAA GAGGCTACAC TGTCAGTGCG ACGTACCGAA
AGGAGCAAGA CAAGGAGAAA CTCGAATCCC AAGGAGCCAC GGCCGTGCAC ATGGATTTTG
TGCAAATGGA CGAGGACGCA ATTCAGAAAG CATTGGAAGG GTTCCAGACC GTCTTCTTCG
CCGCCGGGTC TGGCGGAAAG GACGTTTACA AAATCGACCG TGACGGGGCG ATCAAGTTCG
CCAATGCCAT TAGACGGATG GAGAACGCAC ATCCTCATTA TATCGTACTG AGTGCGCTCG
GTTGTGATCA ACCCGATAAA ATGCCAGAAA ATTTGAAGGA ATACTCCAAA GCGAAGAAAG
AAGCGGATGA CGTCATTGCC GCCATGGAGG ACAAGGGAGT CCAATCGACT ATCGTCCGTC
CGGGTAATCT CACGAACGAT TCCGCCAAGG AGAATATCAT TTTCCGGGGA GTCGTGTACG
GACAATCCAT CGAGGCCAAA TCAATTGTCG ATTCGTTCGA CGCCAACGAG CTTGTTAACA
CAAGATCGGA CGTTGCCAAA GTTATGGCGG AATCGGCTGA CATCTTTACC GATAACAATA
ACAGAAAGAC CCGTGTTTTC GAAATGATCC AAGGAAACGA AAGCGATCAT GGTTCGCCAA
TTCATGAAGG CTTGTCTTCG ATGAAGTTAG ACTACAATAT TGCTCCGCAA AAGTCCTAG
 
Protein sequence
MTETRKAFVV GGTGGVGSIL IDELIQRGYT VSATYRKEQD KEKLESQGAT AVHMDFVQMD 
EDAIQKALEG FQTVFFAAGS GGKDVYKIDR DGAIKFANAI RRMENAHPHY IVLSALGCDQ
PDKMPENLKE YSKAKKEADD VIAAMEDKGV QSTIVRPGNL TNDSAKENII FRGVVYGQSI
EAKSIVDSFD ANELVNTRSD VAKVMAESAD IFTDNNNRKT RVFEMIQGNE SDHGSPIHEG
LSSMKLDYNI APQKS