| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49839 |
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| Symbol | |
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| ID | 7198567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 45190 |
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| End bp | 48864 |
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| Gene Length | 3675 bp |
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| Protein Length | 1164 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184721 |
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| Protein GI | 219129071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTCCG CATCGACTCC AATTTGCAAC TGACTGTCAC AATCCATTCT GATAGCTGCA
CTGCTTTGAG TAAAGACTGC GGGTGCCATA ACGAAGCACT CGGCAGACTT TCCCTCTTGG
GTCTAGGCTA GGTATCAGTA GAACCGTTGC CGAGAGTCGA CGCTATCCAT ATTTCGCGCC
ATGAATGAAC AGTCGGGAAT AAGCAGTGAC GAATCTTACG CACAGGATTG GGTTGTGGAA
TTCGAAGTGA TTGATGAAGC TGCAGAAAGT GCATCGCACG ACGCCGTTCC TGCTGCGGAT
CAGCGACACC TGCAAGAGAA TGTTGAAGAA GTTGCCGGAC TTGAAAATTC CGGGGTCAAC
CTCGTGAGCA ACGGCAGCCT GCCAGAAGAA CAACAATTGC AGCAACAGGA ACAGTATCCT
AAAGCATGGC ACTTCGGCGT AAGTGATGGC AGCGACGATC CTTTGAACTT TTTGCTTTCG
GAAGATGATT CTGGTGTTCG CGCCTTCGGA ATTTCTGGTT CGTGTATACA GCCGACAGAG
CCCCCCGAAT CTTTTTCTTT CAATGTTGAA CAAAAGCAAG CAGTAGAAAC GTTTCTTTCC
GGCGAAGCGA TACTCCAGAC GCCCGGAAAC CACGTAATCT TGGGTTGCCG GAACTTCGCA
CCTTCCCCGG CGAATCACAA GTTTGACCAT CTGTTGCAGC AATACTGGTT GGATGTCCGC
GCAGTCGAAG GCGCACTGGA AAGTCGGAAG CGTAAAACGG CCGATGTTAT CGAAATCATC
CATCGGCACG GTGACTACTT TTGTTTTTGG GACGCCCACG ATGGGCCCCG GGACGACAAT
GGTAAACTGT GCAGTCTTAG TGCTACAACA TGGCAAGCGT TTTGCTTTCG GAGGCTCGAA
AGTGATAAGG AGCTCAAAGC CAAGCTACGC TTCCCACTCG AAACGAGTCT GAACCGGCTG
ACCGGACGAA CTCATCACCA GCACTCGTCC TCTGGAGCTT CAAGCGTATT GGCTGAGCAA
GGTATGGGTG GAATTTCGAG GCCACTCATG AACCTTTCTA TTCACGCCGA ACGTGAGCCG
TCGGATGCAG CGGAAGAGGC CGTTCCGGCA TCTACCCGAA AGCGTTCCAT ACCTAAAAAA
TCCCATCTGC AAAAAGAAGC CTCCTGGAAG TCAACCCTTC CCAGTTCCAA TATACATGAG
ATTGATTCAG AAAGTGAAGA GCCCGGAGTA TCGGAACCAC TGTACGGCAG ATACAAAGAA
ATGAAGGATT TGAAAGAAAA GGTCTCGCCC GACGGTAAAT TAGTGTCTTT GGTGGGTCGA
TCGGGTGTTG GAAAGACCCA TCTTGCACGT GTCTTTGCAT GGGAATGGAC AAAAGAGCGA
GACAAGAACT GCACTCGTTT TGGCTTTTGG CTCAATGCAG CTACGGAATC AACTTTGCGC
GAAAGCTACG AAACCGCAAT TCGACGACTT CGCCACGGGA CGAGTCTTGA AGAGCCTTCG
GCGAAACGAC GAATGGTAAC TATCCAAAGC CTAGCCCTTC GTCTTTGGGA AACTCTTGCT
CAATTATCTT TGTCGTTCGA GTGGATTCTG GTATTTGACA ATGTCCCGGC CTTTGTAGAA
GCCTTAGATG GAACAAAAAG AGAGGGTCCT TTGGGATTTC AAGAGTGGTT CCTTCCAAGA
GACTGGAGAA ATGGTCGTGG CCGGATACTA TTGTTATCGA CACACGATGG ATATGTTGGG
ACAACAAAAT CCAGCATGGG ATATATCGCT CAAATCCGTG TCGACCTCTT GGATGAAGAA
TCAGCTGTGC AAATGTTACA AGCAGATCTG CCGGAAGAAC AGGGCAGCGA GGCCTCATTG
CATCGCTTGG TTTCGTTATT CGATTGTTTA CCGCTAGCTA TAGCTACGGC AAAGGGAGAA
TTGCTGAATG ACGTGATAAG TGTCGACCAG TACATAAAAC GGAACAATTT TGATGCTGTG
CAAAATAGGG TCCAGGCGGC CATCAGAAGT TCTTTAAATA ACGCTTACCA ACGGGGTCTC
GGGAAAGTTC TGGATGTGGC TGCTTATGTG AACCCCGATT CTATACCGCT GATTTTGTTG
GGAGGAGAGA GCGCCAATAG AGCAGCGATA CAACTCACGA AGTGGAACAT TCTGAGGAGG
GACTGGAAGA CAGATAGTAA TGAAGAGGTA TACTCCATGC ATCGGCTGCA TCAAAATGCT
GCACGGCAGG TCTCATTGGA AAATGGATGT TCGCCTGGAG CTGCTCTCCG AGTGGTCCAC
GAAAATATTA CAACATTTGA TCGCGACACT CCTGCACATT GGAAACTCCC AGCTGCCATG
GTAAAGCACG TGGTCGCGCT AAAGGAGCGA GTGGAAAGCT GGCCTTCGGA GCTTTGTTTC
GTATGGGCGC AAACTCTTCA GAAGACTGCA GAAGTGAACC GGTGGGTAAA TCATGACTTT
GGAGGAGCGA AGAAAATGTC GCACTCTTGT ATTTCGGTAT GCTCCAGCAT TTTGAAGTCG
GAATGCCTGC TAGCAGAAGT GCGAGAAGCT GTCAGTGAAG AAATGGTCAA GGTACACATG
TTCCTTGGAA AACTGCACCG ATCCTGTTCG CAACCGGACG ATGCAAAAGA AAGCTTTGAC
CGAGCGCGCA ACCTTTTACG ACTTTGCCCA GCAAGTGATG CGCGTTCCTG GCTGGAGGCT
GACATTTTGG ATGACATTGG GAGACTGGAG CACAACAAGA GTTGCTATGC CCAGGCCCTG
GAACACTTCC GGAAAGCTCT TGAAATTCGA TACAGAGCGA TACCAGACTC TACGCGAGGT
GAATTGGTAG GTTCCCCTTT TTATTCCAAC GATGAAACCT ATTCCACAAG GCTCGTTGAA
CAAGAAGCAC TGCGCGACTT AGGCCGAAAT CTATTGAAGT CACTATTAGA GTCAGCGGAC
ACGGACGTTT CCCTGCCGAA ACCGCAACCT GTAGAGCGAG AATACAGCGC TCAGCGAAAA
GTTCTCGGGG CGCTTGCGGA CACCCTCGTG AATTTTGGCC GATCGTACCG TGAGGGCGAA
GATTGTGAGG GCGTACAAAC CTGGACTAAA GAAAATTATG GACGCAGCTA CGGCGAAAAT
GGCTACCTCG AAGAAGCCTT GTTCTGGTTT GAAGCAGCTC TTGGAGCGCA ATCTCTGCAG
TTTCGGAATG AGATTCAGAA TGACTCAGTG GCAACTACCA TAAGTCACCT CGGCCGAGTC
CATATAGCGA AAGGGAACTT TGCTACAGGG CTGGAGATGT TTCAAAAATC TCTCGCCATG
AAGCAACATG TATATGGCAA GGAGAAGGGC AACGAATCGA TTGCTACAGC TTGGGGTAAC
GTGGCTACAG CTAAGAGACT TATGGGAGAG TGTCTCGTGA GCGAGCATCG TTTCGAAGCG
GCATTTCAAT GTTACACTGA AGCCTTTGAG AATTACAAAC GAGCCCTTGG TATGCTGAAG
TCTCTTTTTA ACGATTCGAA CCACAAAAAA GTGCGAGAGA CTTGCGCCGG GATTATGAGC
GTAGCAAATT CGGTGTCACT TCTGACCGAC TTGTTGATCG CCATGAATGA CCCTGACGCC
ACACTAGAAA TTAATTGCCG TGGGCTCGTC GAGTGCTGCT CTAATTCTAT ATCCGACCAG
CAATTCGAAC AGTAA
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| Protein sequence | MNEQSGISSD ESYAQDWVVE FEVIDEAAES ASHDAVPAAD QRHLQENVEE VAGLENSGVN
LVSNGSLPEE QQLQQQEQYP KAWHFGVSDG SDDPLNFLLS EDDSGVRAFG ISGSCIQPTE
PPESFSFNVE QKQAVETFLS GEAILQTPGN HVILGCRNFA PSPANHKFDH LLQQYWLDVR
AVEGALESRK RKTADVIEII HRHGDYFCFW DAHDGPRDDN GKLCSLSATT WQAFCFRRLE
SDKELKAKLR FPLETSLNRL TGRTHHQHSS SGASSVLAEQ GMGGISRPLM NLSIHAEREP
SDAAEEAVPA STRKRSIPKK SHLQKEASWK STLPSSNIHE IDSESEEPGV SEPLYGRYKE
MKDLKEKVSP DGKLVSLVGR SGVGKTHLAR VFAWEWTKER DKNCTRFGFW LNAATESTLR
ESYETAIRRL RHGTSLEEPS AKRRMVTIQS LALRLWETLA QLSLSFEWIL VFDNVPAFVE
ALDGTKREGP LGFQEWFLPR DWRNGRGRIL LLSTHDGYVG TTKSSMGYIA QIRVDLLDEE
SAVQMLQADL PEEQGSEASL HRLVSLFDCL PLAIATAKGE LLNDVISVDQ YIKRNNFDAV
QNRVQAAIRS SLNNAYQRGL GKVLDVAAYV NPDSIPLILL GGESANRAAI QLTKWNILRR
DWKTDSNEEV YSMHRLHQNA ARQVSLENGC SPGAALRVVH ENITTFDRDT PAHWKLPAAM
VKHVVALKER VESWPSELCF VWAQTLQKTA EVNRWVNHDF GGAKKMSHSC ISVCSSILKS
ECLLAEVREA VSEEMVKVHM FLGKLHRSCS QPDDAKESFD RARNLLRLCP ASDARSWLEA
DILDDIGRLE HNKSCYAQAL EHFRKALEIR YRAIPDSTRG ELVGSPFYSN DETYSTRLVE
QEALRDLGRN LLKSLLESAD TDVSLPKPQP VEREYSAQRK VLGALADTLV NFGRSYREGE
DCEGVQTWTK ENYGRSYGEN GYLEEALFWF EAALGAQSLQ FRNEIQNDSV ATTISHLGRV
HIAKGNFATG LEMFQKSLAM KQHVYGKEKG NESIATAWGN VATAKRLMGE CLVSEHRFEA
AFQCYTEAFE NYKRALGMLK SLFNDSNHKK VRETCAGIMS VANSVSLLTD LLIAMNDPDA
TLEINCRGLV ECCSNSISDQ QFEQ
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