Gene PHATRDRAFT_49832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49832 
Symbol 
ID7198660 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp30092 
End bp31177 
Gene Length1086 bp 
Protein Length262 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184632 
Protein GI219128885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.617782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGGCAATCAT GGTCTTGCGT ACTAGTCTCA GCAGTACGAT GGAACCCACA ACAAAGACCT 
TCAAATCTGC CAGTATATCT CCTGCTTCAA CCCCAAGCAG AGGATCTTCG TCGCCGCGTC
GAAAATCATC CAAGTCATTA AACAAACCGG CCGTCATACC CCAAACCCAG CACTCCATTC
TCTGGTGTGG CATCGCTCGC AATCACACTC CTCTAGCCCG TGTATTGGTT GGTGGGAAAA
CCCAGGATCA CGCAAAAAAT GTAATTGCTT TGGGTCGTTC CATAGTCAAG GCGGAACCGA
AATCTGGCTG GGATTACTTT CATTTCGGCA ACGACGAACA AGAGTACGGA GTTCGCGGTG
TCAAGTTTCA CGTATACGAA CGTAACGCCT TTGCGCCAGG TGAGAAGGTC ACCCTTCGAG
GTCTGGTCGA AGAAACTTTT TTGAACGGTC AAAAAGTCGA AGTGGTTGCG TACTACGCCG
ATCAAGATAA GTACCGGATC CGTCCCGATG CCTCGTTGAA TGCACAAGAA ACTTTGCTGG
GAGATGGCAC AGTGTACGTA CCGAGCGAGC ACGTGGTCGG TCAATCTAGT TTGGAATACA
TTGTTTGGAC CTATGCTTGT GTGTACCACA ACAGAAAGAT GACGCAAACG TCGGCCTGTT
TGTTTGTGGA AAAACTAGCG GTTCTTTCCG AAGCGTTGAG GGGACCGTGG CGCGAGGTAG
ACCGCCTTGG GGCTCAAGAT ATGTTTGCTG CCGTTATGCA GGCCCAGGCT GAAATGTATG
AAGCCGTTGG CAACGAAGCC TTTCACGAAG AGTCCTTGGA ATATTCGAAA CGCGTAATTG
AAAACAATAT CGAGCTCTTG TCCGAAGGGA GCTTTTAGGA CGTAAAAGCC TTGGCAGATA
TGTTTGGGGT CGTGTACTGC AGTGCAAGCT AGATACCGAG GCGATCTACC GCAAGCAGTC
AAGCCCGAAC TTCACAAAAT TTACGTTGTG CATGATTGTA AACATCTTTG TGTGATCAAT
CTATTTACAG GTTATGGATG ACATGTCAAA GTAACTAGAT CCCTCTAAAG GATTTCTTTG
TTTTCA
 
Protein sequence
MVLRTSLSST MEPTTKTFKS ASISPASTPS RGSSSPRRKS SKSLNKPAVI PQTQHSILWC 
GIARNHTPLA RVLVGGKTQD HAKNVIALGR SIVKAEPKSG WDYFHFGNDE QEYGVRGVKF
HVYERNAFAP GEKVTLRGLV EETFLNGQKV EVVAYYADQD KYRIRPDASL NAQETLLGDG
TVKMTQTSAC LFVEKLAVLS EALRGPWREV DRLGAQDMFA AVMQAQAEMY EAVGNEAFHE
ESLEYSKRVI ENNIELLSEG SF