Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49832 |
Symbol | |
ID | 7198660 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 30092 |
End bp | 31177 |
Gene Length | 1086 bp |
Protein Length | 262 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184632 |
Protein GI | 219128885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.617782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGGCAATCAT GGTCTTGCGT ACTAGTCTCA GCAGTACGAT GGAACCCACA ACAAAGACCT TCAAATCTGC CAGTATATCT CCTGCTTCAA CCCCAAGCAG AGGATCTTCG TCGCCGCGTC GAAAATCATC CAAGTCATTA AACAAACCGG CCGTCATACC CCAAACCCAG CACTCCATTC TCTGGTGTGG CATCGCTCGC AATCACACTC CTCTAGCCCG TGTATTGGTT GGTGGGAAAA CCCAGGATCA CGCAAAAAAT GTAATTGCTT TGGGTCGTTC CATAGTCAAG GCGGAACCGA AATCTGGCTG GGATTACTTT CATTTCGGCA ACGACGAACA AGAGTACGGA GTTCGCGGTG TCAAGTTTCA CGTATACGAA CGTAACGCCT TTGCGCCAGG TGAGAAGGTC ACCCTTCGAG GTCTGGTCGA AGAAACTTTT TTGAACGGTC AAAAAGTCGA AGTGGTTGCG TACTACGCCG ATCAAGATAA GTACCGGATC CGTCCCGATG CCTCGTTGAA TGCACAAGAA ACTTTGCTGG GAGATGGCAC AGTGTACGTA CCGAGCGAGC ACGTGGTCGG TCAATCTAGT TTGGAATACA TTGTTTGGAC CTATGCTTGT GTGTACCACA ACAGAAAGAT GACGCAAACG TCGGCCTGTT TGTTTGTGGA AAAACTAGCG GTTCTTTCCG AAGCGTTGAG GGGACCGTGG CGCGAGGTAG ACCGCCTTGG GGCTCAAGAT ATGTTTGCTG CCGTTATGCA GGCCCAGGCT GAAATGTATG AAGCCGTTGG CAACGAAGCC TTTCACGAAG AGTCCTTGGA ATATTCGAAA CGCGTAATTG AAAACAATAT CGAGCTCTTG TCCGAAGGGA GCTTTTAGGA CGTAAAAGCC TTGGCAGATA TGTTTGGGGT CGTGTACTGC AGTGCAAGCT AGATACCGAG GCGATCTACC GCAAGCAGTC AAGCCCGAAC TTCACAAAAT TTACGTTGTG CATGATTGTA AACATCTTTG TGTGATCAAT CTATTTACAG GTTATGGATG ACATGTCAAA GTAACTAGAT CCCTCTAAAG GATTTCTTTG TTTTCA
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Protein sequence | MVLRTSLSST MEPTTKTFKS ASISPASTPS RGSSSPRRKS SKSLNKPAVI PQTQHSILWC GIARNHTPLA RVLVGGKTQD HAKNVIALGR SIVKAEPKSG WDYFHFGNDE QEYGVRGVKF HVYERNAFAP GEKVTLRGLV EETFLNGQKV EVVAYYADQD KYRIRPDASL NAQETLLGDG TVKMTQTSAC LFVEKLAVLS EALRGPWREV DRLGAQDMFA AVMQAQAEMY EAVGNEAFHE ESLEYSKRVI ENNIELLSEG SF
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