| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40792 |
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| Symbol | |
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| ID | 7198646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 411627 |
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| End bp | 413768 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184800 |
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| Protein GI | 219129236 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.162987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCT ATGAACGTGC CGTACGACAG CAAAATCCAA CACCGGATCC TCCGGTCAAT
CCTCTTCCTA TAAAGTCAAC AGTAGCGGCG ATCGACAGCG ACGCGAATCC CTGGAGTCAA
CTGGCACACG AGTGGGGAAG TATCAATAGC GACAATGATG ATGGTGCCGG GGTTGCTACG
ATGGCACCAC CAGTCTTTCA ACCGCCGAGT CAAGGCGGTA ATTCCCTCCA CAGTGCATCC
GCGACCCCCA TATCTCCCTC TACAAACACA CCATCTTTGG AAGAACTCGC GATCATGAGC
CGCGACGCCA AAGAAAACTT ATCCCGCCTC GAAGAACTGG AGTCGGAAAT CATGGACATG
ATCGATAGTA TGAAAGTCAA AGACGCTACG TACCAGACTA CCATTCGCAA ACTGGAACAG
GACTCTTCCG TCCTACAAAA TACGCTACAG GGCCAACTGC AGGCCCTTCA AACGGAATAC
CAGGAGTTCA AGGCCACCGC ATCGCAGCAA TCTCAGGCCG ATCGGCAAGC CACCGTGGCG
GCACAAGCGG CGTGGCAACG CCAGGTCCAG GACCTGCAAG CAACGGTGCA ACAGTACAAA
CAGACCGCCT TGGAGGAATC ACAAAGCCTT CAAGATATGG TAACGCTCAA GACCAAACTG
GAAAATCAAC TTTTGGACCT GCAAAAGGAA TCCACACTTA TGATTGACGA ATTCCGTACC
AAATTCTTTG CCGAACGGGA CGCCCGCTAT CGTGAAGTCC AAAAGGCGCA AGAAGATATT
GGTAGAATGG AACTGCAAAC CCGCGATATG CTCCTTGATG CCTTGAACGA AGGCCAGCAG
CAGTTGAATC GGGAATGGAC GGACTATACA TTTCAACTCA TTCAAAAAAC GGAAGAGGTC
CTGGAATCGC AGAATGCGTT GGAACAAGCC AGCGAAGGAT TACGCCAAAA GGATGCCCAA
TTGGCCGACT TACAGGCGCA CACGGCCTAT ATGCAGAGTT TGGCCGACGG AAGTTTGCAG
CTTCTGCATA AAGTTCACGA TGAAACCCTC GGTGGACCCC TGTCGACGGA AGCGGTAGAT
TTGCCAACTT TACAACAACG AGTCGGCGCC ATGGTCGAGA CCTTTAAAGC CAAGGATGCC
GACTACCGCA GCACAATGCA ACGATTGCAG TCAGAATACG GTCAAAAAGA GGCGGCCCTG
CAGCAACAGC TGCAAAAGTT GGAGGCAGAG TATCAGCAAT TTCAGACACG GACACGAGAC
GATCACACGC AGGAGTTACA GGCTGCGAGT GAAGTTCAGT CTCGTTTGCA ACGGGAAGTG
GCCGAGTTGC AGACGAAACT GACGCAACAA GTGGAACTCA CCAAAACGGA AAGCGAAAAA
GCGGCCCAGT TTTTTCAACG AAGACTGGAA ACGGAACGGG AATTAGCCAT CCTCAAGACT
AACTCTACGA AGGCGATGGA CGAATTCAAG GCCTTGTACG AAGCCGAACA AAAAGCACGA
CTAAAGGAAC AGCGATTGGC GTACGAACGC TTTCAGGAAA TGTTTCGCAC AGGGCGACGC
TGGGTGCGCG ATGCCTATAA GGACCGACAG GAGGAAGTCA AGAAAGTTTC CGAAAGCCTG
TCGACAGAGT TGAAAGCTAA AGATAAAGAG CTACGTAAAA CGAAGGGATC GCTGGGATGG
AGCGCCACGT TTTTGATTGC ATTGGCCCTG TGTGTCCCAG TGTACGTTGG CTTGGAAGTG
CCTCCCGCGG TGTGGGACAC CGGACGGTCG GTCGGATCCG CGGCGTCGAC TCTGAAGGAA
CGTGCGTTTC CCGAATCAAG TACCGGCGCG GCTAGTAGCA AGGCTCTTCC GATTGGACCG
GAACGTGTGA AACAGGAACG TTCGAAACCT TCGTCAGCAA CTCCGGCCGT TCGTATCAAA
GCAGACGACG AGCCTCGTGG AGCACCTTCG CAGGCATCTC CCGAGCCTGT CGAAACCACC
GAATCAGCGA GATCAGCCGA GCCTTTGACG GAAACAGTTA AATCCATAGA AGTTGTGACT
ACAAGGGTTT CCCCCAAGAA ATCGCTGAAG AAGTTGTCAT CCGACAGTAT CCCTTGGGGT
GAGTATTCCG AGGAGTTTGT AAAGAGCTAC GCTAAGCAAT AA
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| Protein sequence | MSAYERAVRQ QNPTPDPPVN PLPIKSTVAA IDSDANPWSQ LAHEWGSINS DNDDGAGVAT
MAPPVFQPPS QGGNSLHSAS ATPISPSTNT PSLEELAIMS RDAKENLSRL EELESEIMDM
IDSMKVKDAT YQTTIRKLEQ DSSVLQNTLQ GQLQALQTEY QEFKATASQQ SQADRQATVA
AQAAWQRQVQ DLQATVQQYK QTALEESQSL QDMVTLKTKL ENQLLDLQKE STLMIDEFRT
KFFAERDARY REVQKAQEDI GRMELQTRDM LLDALNEGQQ QLNREWTDYT FQLIQKTEEV
LESQNALEQA SEGLRQKDAQ LADLQAHTAY MQSLADGSLQ LLHKVHDETL GGPLSTEAVD
LPTLQQRVGA MVETFKAKDA DYRSTMQRLQ SEYGQKEAAL QQQLQKLEAE YQQFQTRTRD
DHTQELQAAS EVQSRLQREV AELQTKLTQQ VELTKTESEK AAQFFQRRLE TERELAILKT
NSTKAMDEFK ALYEAEQKAR LKEQRLAYER FQEMFRTGRR WVRDAYKDRQ EEVKKVSESL
STELKAKDKE LRKTKGSLGW SATFLIALAL CVPVYVGLEV PPAVWDTGRS VGSAASTLKE
RAFPESSTGA ASSKALPIGP ERVKQERSKP SSATPAVRIK ADDEPRGAPS QASPEPVETT
ESARSAEPLT ETVKSIEVVT TRVSPKKSLK KLSSDSIPWG EYSEEFVKSY AKQ
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