Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40786 |
Symbol | |
ID | 7198643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 397879 |
End bp | 398685 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184699 |
Protein GI | 219129025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATGTC TAGCGGAAGC TACCAGTGAT GACAGTAGCA ACAAGAATAA CTCGAGCAGC AGTCCGGAAA AGGAAAAGGT GATTCCGCGG AGGAACCTCA CCCAGGCGTT CGATGCCTTG TGCATTGAAG AAGAGCTCGA GAAAGCCACG GACAGCAGCG CCGCTTTACT ATCTCCTTGC TGTGTCACTT CGGGTAAAAC TGGAGACGTC TTGATTTCTC CCACCGGTGT TATCGGTGCG ACTGTTTTTT CTCCGGAACA AGTAATGATC GAGGAGACAC ACGCTGACAG TAGTATTCTG GCCTTTGACT TGCATCCTGA GCTCAAGCTA GAACTGTCTA AGGCTTTGGT GAACCGCGTT TCCTTTTACG GAATTGTCCA TGACATTAAC AAGGAAGCCA CAGCCATGAT GTCGAACGAC ACCCTTACAG CATGCCACTC GAACGATGGT GAAGACAGCC ACCCTCTGGT GTTGGCGGCT TTGGATGGCG TAACTACGAG TGAAGCAGCT ACAACCGAAA CAGCTGTTTT TGATTCTTAC ACTGAAGACT CTGCAATGAT TGATGAGGAA GCCTGGTTGC TGCGAACGGT GGCGGTCAGC GATGCGACGG AGCCTCGCCT GGAGGATGCC GCATGCCCGG CGACATTTTT GCAAGCTATT GGCGAAAAGG AATACGAAAA TTCTGTCTCG TCTTTATCCA AAAATTCGCG CACACAGCTT TGGAAACCAT CAAGGTCTTG GTGGGAAGCC AAGTCGGGGA AGAATCCATG GATTGAGCCG GTTTCTCACA ATAAGCGATG GCGGTAA
|
Protein sequence | MACLAEATSD DSSNKNNSSS SPEKEKVIPR RNLTQAFDAL CIEEELEKAT DSSAALLSPC CVTSGKTGDV LISPTGVIGA TVFSPEQVMI EETHADSSIL AFDLHPELKL ELSKALVNRV SFYGIVHDIN KEATAMMSND TLTACHSNDG EDSHPLVLAA LDGVTTSEAA TTETAVFDSY TEDSAMIDEE AWLLRTVAVS DATEPRLEDA ACPATFLQAI GEKEYENSVS SLSKNSRTQL WKPSRSWWEA KSGKNPWIEP VSHNKRWR
|
| |