Gene PHATRDRAFT_40783 details

Gene Information

• Locus tag: PHATRDRAFT_40783
• ID: 7198640
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 386319
• End bp: 388405
• Gene Length: 2087 bp
• Protein Length: 663 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184794
• Protein GI: 219129223

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.26017
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGTGG CTTCTGGGGG AAGTATGGGT ATAAAGAAAG GACCCGTTAT CCCATTAGAA 
CGGTACGTAC CGAACGAGTA CACACAGCAT TGGTTTTGCT ACTATACACT GCGAAATTAT 
TTCCACGCTC ACGTTTCTTT ATATCTTGCA CTTGTAGCAA AGAATTGATT TCATTAGGCT 
CCTTATGGTT TGGCCTTTTC GTAATCCTCG CCTTACTCCA CGCCGCCGAG ATTGCCATTA 
CCACCCTTTA CCCCTGGAAA GTCCGCGAAA TTGCCGAAGA AGAGGAAAAG CAAGGCAACA 
TGCGTGGCAC GTTCAAAGTT CTCAACGAAG ACATTACCCG CGTCCTTACC ACAATCCTGG 
TTGCCTCGAC GGCCTGCTCC ATTTTTGCCA CGACTTTGTT TACGCATTTG GTGGCGAGCC 
TGTTTGGATT GCAAGGCGAA CGATACGGTG CCATAGCACT AACCGGATTG ACGTTGTTCT 
TCGTGGAACT TTTGCCCAAA AGTTTGGGTG TCACCAATGC CGAAACAGTC GCACGAATAA 
TGGTACCACC CGTTAATGTC GCTTCGGCTA TTGTGAGTCC GCTCGGTATT TCTCTCTCTT 
GGCTAGCCAA GCGCACCTTG TCCATGCTAG GTGTCAAGGA CAAAAACAGT GGCTCGGGTG 
TATCCGACAG CCAGCTGCGC TTGATTGTAA CGGGCGCCTT GGATTCGGGT ACCATTGATC 
ATGGTGAACA AGAAATGATT CAGGGTGTTT TAAAGTTACA AGATCAGCGG GTGAAGGAAA 
TCATGCGCCC CCGCGTCGAA ATGGTAGCAG TTCCAGTAGA CATGTCGGTC GCTAGCGTAC 
TAGGCGTCGT TCGAGAGTCC GGATACTCAC GAATTCCCGT GTACGATGGC GAGATCGACA 
ATATCGTGGG CATTGTACTG GCCAAGTCCG TGTTGGATTT TTTCGTAAAT GGAGTGCTGG 
TCGACGAAGA TTTGAGCAAA AAGTTGGGTA AGAATACCGA AGAAATCAAG GCTGCAGTAG 
AAGACCTCAA GGCCGCTGAC GAAGCTCGTC GCGGCGAACT ACCTGACGAT ATACAAGCCG 
ATGCGGACAA GGTCATGGAA CGCGTGGATC TTAAAATTGA TGCACTAGTC GATCAGCGTA 
TCGATGCGAA CATTGACGCG TCCCTTCCAC CCAGTCTATA CACTCCGGAG CGTATTCCGA 
TTCGTAGTAA GGGCAACAGC AATGAACCAC AAGGATATGT TCGATCACTG ACAGCAACCG 
AGTTGGCTTC TCGGATGGAG AAATCTATCC AGGAAGCTGG CTTGATCGAG TCTTGTTATT 
TTGTGCCGGA CACCGCCAAC GGGTGGTCAG TTCTACAAGA AATGCGTCGT CGTCGGGTGC 
ATTTGGCAAT TGTCGTGGAC GAATTCGGCG GAACAGGAGG ACTGGTGTCG CTGGAAGATA 
TTGTGGAAGA AGTGGTTGGT GAAATCTACG ACGAAGACGA CGATGAGGAT TTTCAGGTTT 
CGGAGGACTC GATTGCCATG CAGGACGACG GAACCTTTTT GATTCGCGGC GACGCCGATT 
TGGAAGACTG CGATACTATT TTGGAACTGA ACCTGGATGA GGAAGAAGCT CTGAAAGAAT 
TTTCGACCCT ATCTGGTTTT CTGTGCATGT GTGCAGGGGA GATTCCTTCG GTTGGGGACT 
TTATTATGAG CCGAGGTTGG TCGTTTGAAA TTTTGAGCGC AGATGACAAG AAAGTGTTAC 
TCGTCAAGGT GGAGCGCTTG GTTGGTGCAT TCGATAATGA AGAGGAAGCA GCGAGTGAGA 
ATGTTCTCAA GAACCTGCTA AAGTTAAATT CCAACAAAGA GCACAACAGC AATCATAACA 
GTAATGACGG CGACTCCGAC AGCGAAAATC GAGACGGCCG GGATTCCGAG CAGGATCGCG 
AACAGCAGGC CGAGGGCGAA CTCCAGAGTA CCGTCGCTGC GAATATGGCT GAAGCCAGAG 
AGATCGAACG TATGGTGGAA GCCGGGGAAC GTAAACGAGC AGTACTGGAA GCAATCAAGT 
TCGCATCGTT GGCCAACAAT ACGTCGCCCG ACAGAAACGA GTTGTGA 

 

Protein sequence

MAVASGGSMG IKKGPVIPLE RKELISLGSL WFGLFVILAL LHAAEIAITT LYPWKVREIA 
EEEEKQGNMR GTFKVLNEDI TRVLTTILVA STACSIFATT LFTHLVASLF GLQGERYGAI 
ALTGLTLFFV ELLPKSLGVT NAETVARIMV PPVNVASAIV SPLGISLSWL AKRTLSMLGV 
KDKNSGSGVS DSQLRLIVTG ALDSGTIDHG EQEMIQGVLK LQDQRVKEIM RPRVEMVAVP 
VDMSVASVLG VVRESGYSRI PVYDGEIDNI VGIVLAKSVL DFFVNGVLVD EDLSKKLGKN 
TEEIKAAVED LKAADEARRG ELPDDIQADA DKVMERVDLK IDALVDQRID ANIDASLPPS 
LYTPERIPIR SKGNSNEPQG YVRSLTATEL ASRMEKSIQE AGLIESCYFV PDTANGWSVL 
QEMRRRRVHL AIVVDEFGGT GGLVSLEDIV EEVVGEIYDE DDDEDFQVSE DSIAMQDDGT 
FLIRGDADLE DCDTILELNL DEEEALKEFS TLSGFLCMCA GEIPSVGDFI MSRGWSFEIL 
SADDKKVLLV KVERLVGAFD NEEEAASENV LKNLLKLNSN KEHNSNHNSN DGDSDSENRD 
GRDSEQDREQ QAEGELQSTV AANMAEAREI ERMVEAGERK RAVLEAIKFA SLANNTSPDR 
NEL