| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40761 |
|---|
| Symbol | |
|---|
| ID | 7198626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011693 |
|---|
| Strand | - |
|---|
| Start bp | 326995 |
|---|
| End bp | 327429 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184780 |
|---|
| Protein GI | 219129194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00483442 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGTA CACTGAATGG ATTCAGCACA CCACGAGGGC GCTCAATCGG GAAAGTAAGA
AGAAATGGAC CTGCCATGTT AAGAAAAGAT GATAAGATCA CACCGGGTGA AGATGACAAA
GTAAAACTAC CGACGAAACT AAATCTAGAC AGCGACAAGG GCAAGGAAAA CGTACCAATT
CGGATCCCCA TTCCAAGTAG TGTCCAAAGA GTTCTCGAAA CAATTTACTA CATATGGAGC
TACGTCGTTA TTGCGCTCGG AATTGCGCTC TCTTTTGGAT TACTTCTGAA TATCTTCGGC
TACGGGTATC AGTTGACGGA AGATGGCTTG CGCATTGATT CAATTGACCA GTTCCGTACC
GAAAACCAAT TTAGAATCGA GGTGATCAAT AGCATGAAGG AAAGTCGAAA GGGAATCAAT
GTAGACTTTA AATAG
|
|---|
| Protein sequence | MPGTLNGFST PRGRSIGKVR RNGPAMLRKD DKITPGEDDK VKLPTKLNLD SDKGKENVPI
RIPIPSSVQR VLETIYYIWS YVVIALGIAL SFGLLLNIFG YGYQLTEDGL RIDSIDQFRT
ENQFRIEVIN SMKESRKGIN VDFK
|
|---|
| |