Gene PHATRDRAFT_40722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40722 
Symbol 
ID7198603 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp237984 
End bp239043 
Gene Length1060 bp 
Protein Length313 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184678 
Protein GI219128981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000570918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCT CCCCTCAGTT CAACCTGAGT GCTTTCCCTC ACAAAGTTCT CGATCCGATC 
GCCACTCTCA CCTCTCCGCC CACATGCGCC TCCATCAAGC TTGCCCAACG TCAGCTCAGT
GCCAACGCTG CCGCCATTCC CTCTCTCAAT GGCGGCGGCG CCCACGGCCA CATGGCCTTA
ACTCTGACCC CCGCGGCCTA CTCCGACCTC ACCGACGTTC CGTTCGTCAT CCCCGTCGCC
CCGCCTGCCG ATCCGGTTCC TGGCACCATC CAACCGCAAA TCGCTGAGAA CAATCGCATC
CACCAACGCG ACATTGCCGT TCACAGTTTG TACGTTGCCG TCAACAACGC CCTCCGTCAA
CAGCTTCTCG ACGCCATCCC CCGCGTCTAC GTCCGCGAAA TCGAACACGA AATCTACGCC
TACAGCCATA TCACCTGCCT CGACCTTCTG ACCCACCTCT GGACCACCTA CGGTACGATC
TCGGCCACCG ACTTGAAAGA AAACATTCAA TCTATGTACA AGCCGTGGAA TCCTGCGGAT
CCCATTGAAA CTGTGTTCCA TCAGCTCGCC GATGCCATAC GCGTTCTCCA TTGCCGGCGA
CAATCCCATC ACCGAAACGG CTGCCGTGCG AGCCGGCTAC AACGTCTTCG AACACTCCGG
TCTTTTTCCC TGTGCCTGCG AAAATTGGCG CTTTGCTCCC CCCGCCGAGC ACACCATGGC
CAACCTCAAA ACCCACTTTA AGCTTGCCAA CACCAATTGA AAACGACAGG CCACCAGTGG
TTCCCTTGGC TATGCCAACC TTCTCTCTGC CACACCCTCC GTGTCCCCGC CTCCACCATC
CGACGCCCTC AGTTTGCCTT TCTCTGCTCT CTCCGTGTCA CACGCCTCCG TTGCCACCCC
GGCTAAAACC TATTGCTGGA CCCACGGCAC CAGCAACAAT CGTCGGCACA CCAGTGCCAC
TTGCCAGAAC AAGGCACCCG GCCATCGCGA CGACGCGACG GCCACCAACA CTCTTGGCGG
CTCGACCAAG GTTTGGATGG CCCCCAAGCC CCCCAAATAG
 
Protein sequence
MSTSPQFNLS AFPHKVLDPI ATLTSPPTCA SIKLAQRQLS ANAAAIPSLN GGGAHGHMAL 
TLTPAAYSDL TDVPFVIPVA PPADPVPGTI QPQIAENNRI HQRDIAVHSL YVAVNNALRQ
QLLDAIPRVY VREIEHEIYA YSHITCLDLL THLWTTYGTI SATDLKENIQ SMYKPWNPAD
PIETVFHQLA DAIRVLHCRR QSHHRNGCRA SRLQRLRTLR GSLGYANLLS ATPSVSPPPP
SDALSLPFSA LSVSHASVAT PAKTYCWTHG TSNNRRHTSA TCQNKAPGHR DDATATNTLG
GSTKVWMAPK PPK