Gene PHATRDRAFT_40716 details

Gene Information

• Locus tag: PHATRDRAFT_40716
• ID: 7198521
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 220793
• End bp: 222958
• Gene Length: 2166 bp
• Protein Length: 542 aa
• GC content: 44%
• Product: predicted protein
• Protein accession: XP_002184675
• Protein GI: 219128975

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAGG CAGACAAGCT TTTGTCCTAT CTTGAGAACA CTCCCGAGAT CAGCTTTTGT 
GCTATATACG ATGACCCAGA TTCACCTCTC TTCACAGTTT ACAAGCAGAG AGCAAAAAAA 
GACCACAGGC ATCTACACAC AAGTATTAGA GTTAACTCCG GGGTATCTGC TGAAACGGGA 
ATTCTTGACA ACACTACACT AGATGCAATG GATCCCAATG GAGAACTTGA TGACTATGTT 
GACCGCACAC GTTGCGCATT CAAGCTCCTT GGCTCGCAAA ACATGCTGTT AGGAGTTGCC 
TGGACAAATA ATGAGAGCAG AAATGTATTC TCTCGTTTTT CGGAGATAAT GGTAGTAGAT 
GTGACGGAAG GCACAAACAA CGCCAAGCGA CCGCTATTTC TATTCTCTGG GAAGACGTCA 
AACCAAAACA CTTTCACAGC ACTGTGGGCT TTTTTACCAC AGCAGGCTTG TTGGGCCTTC 
CATTGGGTGT GGACTCGATG CATACCGCAA CTACTCCCAA AGCAAGGAAT TCAACATGCG 
CCTGACAATA ACAGATGGAG ATCCAAAACA GTACAGGACC TTTGTAGATG CAATACCAAC 
TTTCTACCCT CTTTGCAAAC ACAAGCTTTG TCACTGGCAT CTACTGTATC GCAGTAATCT 
CATGAAGGTG CAGACTGGAA AATGTGGAGT TAAAGCTACT ATTCTATTCC GCGTAGTTGT 
TCTTTGGATT GAGAGCTGGA TGACCAAAAT TGAGACACAA GAGGAATACG AACTTTCTAA 
AAGGCTCTTG GCTGATTGGC TTGCAACCCC CGAAGCTATT GATGTCAAAT TGGGTGGTAT 
GGGGCAAACT ATTGTATCGC AAATTAATGC GTACATGACA CTGTCACTTT TTCCTCATGA 
ACAGCGCTGG GCTAGATATC GCTATTTATA CACACAAGCA TTCAACACAT CTGCAAGCTC 
GTATGCCAAG GCAGAAATAG TGCTTTAAAA CGACGGGGCG ACGGGGTCAG GCCAAGCTTT 
TCCGTACCAA AAGCAACTCA GGTTATAAAC AAAGGGACAC AACCTAGGTC AAAGAAGAGG 
CATCAAAAAG CTGTTTACAA TTTAAATGCT GCCAAGACGA GAAAGCCTGC CTACTACGCA 
AACATTCGGG ATTTAGTGGA TTACATTCAA GATTCTCTTT CCAAAGATTT TGAAGCAGTT 
GCTTCATTTG TGCTCTTCTG TCCAAATGCA GACCAGTTTT GGGTCAAGCA AGCCACTCGC 
AAAAGCAAAA ACACGGACAT TCGGAAAATC AACGACAGTA GCTATTACAA GTACATGATT 
CCGCAGTTTG AACGCACACG AATTGTGGAG CTTGTTAATA TTGATGGTAC ATTCTATTTG 
GTGTGTAGCT GCGGAAAATT TCAGCGACAA GCTTCCCCAT GTGCCCATCT TTACAAGGTT 
CTTGGTCAAT CACCCACATC AACCGATGTC TCTGTACGCT GGACAAAGCA CTGGGATGTG 
TATTTGCACC GAAGTGGCCA CAGTGACCTG TCAAAGCATT TGGAAGACCT GTACAAACAG 
GAGCGACCAG GTCCAGTATT TGTTGATAGT GGTCAGTGGG TGATCGGAAA AGGTGAAAAA 
GGGTCAAATT TTTTCGAAAC TTCGCTTCCG TACAAGCCCC CTGTCATACG AGATTTTAAT 
CGATGGGCAG TGTCTTCGCA AACGACTGGA GCTGATTTGA GTGGGACCAA AAATACCACA 
AATATGTATT TTTCGAGTGG AATGGTGCAA GAATCAACAA GCCTGTCCAG AGAGCATGCA 
TTCCAGGATT CATTGCATTA AACTTCCACA AATTCGCAAA ATTCGGATTG TTTTGATGAT 
ACACAGGCAG TGACAACGGA AAGCGTATCT TCTACGAAAA GAATGTTTGG TTCAAGTGCT 
TTTGTGCACA ATTTCCATTT CTACCAGGAA ATGTCCAAGC TGGCAGGATT TGATATGGAA 
GCTGCTGAGT CGATGAATAT AGCTATGCAA GAAGCATTGG AAAAGGTACA AGCCAATGTT 
GCAAAAAGGG CTGGGAAGAT GGATTACACT ATAGGACCAG CCATTACAAA GGACCATGTA 
GGTCTAAGAT TGAAGCCAAG CTACAGTCCA AAGAAGAGGA GGAAACCAAA CTTACAAAGG 
AAATGA 

 

Protein sequence

MTQADKLLSY LENTPEISFC AIYDDPDSPL FTHCGLFYHS RLVGPSIGCG LDAYRNYSQS 
KEFNMRLTIT DGDPKQYRTF VDAIPTFYPL CKHKLCHWHL LYRSNLMKVQ TGKCGVKATI 
LFRVVVLWIE SWMTKIETQE EYELSKRLLA DWLATPEAID VKLGGMGQTI VSQINAYMTL 
NSALKRRGDG VRPSFSVPKA TQVINKGTQP RSKKRHQKAV YNLNAAKTRK PAYYANIRDL 
VDYIQDSLSK DFEAVASFVL FCPNADQFWV KQATRKSKNT DIRKINDSSY YKYMIPQFER 
TRIVELVNID GTFYLVCSCG KFQRQASPCA HLYKVLGQSP TSTDVSVRWT KHWDVYLHRS 
GHSDLSKHLE DLYKQERPGP VFVDSGQWVI GKGEKGSNFF ETSLPYKPPV IRDFNRWAVS 
SQTTGADLSG TKNTTNMYFS SGMAVTTESV SSTKRMFGSS AFVHNFHFYQ EMSKLAGFDM 
EAAESMNIAM QEALEKVQAN VAKRAGKMDY TIGPAITKDH VGLRLKPSYS PKKRRKPNLQ 
RK