Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40695 |
Symbol | |
ID | 7198592 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 165835 |
End bp | 166804 |
Gene Length | 970 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184662 |
Protein GI | 219128948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.626226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAAG ATACCTGCGA ATCTCTGGTC GCCTTCTACA GCTCATTTTA CAGAAGAGAA AGGAGCGGTT ACCCTCCATA CGTACCAGCA CAATGGATAT ACTCTAACGT ATCAGTACAA GGCCGCTACG AGTGTAGAAT ACCGAGACCA ACCGCCCATT TTACTGATTC ACCCGGTAGG TATCGGCATG TCGAGTTGGT TCTGGAAGCG TTTCTTGAGT ACTTGGCAAG GACCAGCCGT GTACGCTGTC GATCTGATTG GCTGCGGAGT CAGTCACGGA GCCGATGCTT GGAATCCGGA AGAGAAAGGC ATGAGTTTTC CTCTTGGATG GGTCAAGGGA TGTGAGGCGT TGATGGAGCA AGTCATTCTC CGGAGTCACA CGAAACCCTT TTCGCTCGGC AAGCGGTACC CGACTTGTAC CATCATGGTT CAAGGGGGCC TTGCTCCAGT GGGTGTATCC TTGGCGTTTC GGAATTCCCA AACTGTTGAT CGGCTAATCT TGGCGTCTCC ACCATCTTGG AAAGACATGA CGACGGCCGT TCCCGAACGT GAATTGGCCC GCAATTACAA CTTTTTGAAA AGTCCACGTT GGGGCAATTT GGCCTTTCGA TTCTTGGAAA CGCGTGAAGC GGTCGAATTC TTTTCCAACG CCTTCCTTTT TGAAAAAGGA TGCGATGCTG AGTGGTTGAA CGAATGCGTC ACCGAAATGG GCGTGGCGGT GCGTCCACCG GTGCAGGTCT TCAACGCTGG TTTTTGCATG CACCGTTCCT ACGCCGAGGA GCTGGAGTCT TTGTCTCAAC CCGTCCTGAT TTTACAAGGC CGAGACGACA AAGCACGACT GTCCGAACGA GCGTTATACG AAACCAGTAT TCCCACCTGT AGAATTGAGA CCTTGCCGGG AAAGAATGTT TTGCCGTGGG AGTCACCCGA TGCGGTCGGT CTGGTCGTCC GAGAATTCTT GGGGTTGTAG
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Protein sequence | MVEDTCESLV AFYSSFYRRE RSGIGMSSWF WKRFLSTWQG PAVYAVDLIG CGVSHGADAW NPEEKGMSFP LGWVKGCEAL MEQVILRSHT KPFSLGKRYP TCTIMVQGGL APVGVSLAFR NSQTVDRLIL ASPPSWKDMT TAVPERELAR NYNFLKSPRW GNLAFRFLET REAVEFFSNA FLFEKGCDAE WLNECVTEMG VAVRPPVQVF NAGFCMHRSY AEELESLSQP VLILQGRDDK ARLSERALYE TSIPTCRIET LPGKNVLPWE SPDAVGLVVR EFLGL
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