Gene PHATRDRAFT_40645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40645 
Symbol 
ID7198569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp53207 
End bp54367 
Gene Length1161 bp 
Protein Length386 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184723 
Protein GI219129075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGT TCTTGTCGTT AGCGGGAGCC TCATCATCAG TCCATATATC CAAAGCCCTT 
CTTGTTCTAA TAGTCATCCA GTGGATTGTG TTTGCAAAAC TAAGCAAGAG ACCCACGAGC
GCAACCCTTA TCGAGCGAAG GCACGGTGCA TCTGGCGTTC AAACCACAGT TTTTGAACCA
GCGAAAGTAC AAGCAAAAGT TACGCAGGTC GACAACGAGT GCAAAAGTTT TGCACCTATT
TCCGAAGTTA TGAACCAAGA AAGCGAGCCA GAGATTGATG GTGTAGCCTT TATGATTCTG
AAAAAGAGAC CATATTGGTT TTTCAAGCGC TACAACGCGC TGCTCGACAG TGCTCTTGCG
ACAGTCCCGA ACACCTGGGC CATTCAGCTT TTTGTCAATC AAGACTGGTT CGAAAACACG
CTATTGCCTA ATCAATACGG CGTCCGGCGT CACGTGCTAG ATAATCCACG AGTGATTGTC
AAGGACTTGC CGCTTAGATT GCAAAACAAT AAACCGGGTC CAATCACAGA AGATCGCTGG
ATATGGGACA ATATCGTCAA TGCCACAACT GCCACAACCG AGACGACGGA CTACTTCCCT
GTTGTTCATT TTCACGGGGG CGGAAGTTTT TGTGCAAATT CCAAAATGTC CTATGCGGAT
CTCCGGAATG CTCGAATTGA CTTCATTGGA CCACCTTCGA CAACTTTTGG TGGGATGGGT
GGACTGGGAG GAGGCTACTT CTACCAAAAT CGCTATGCCG CACTGGCAGT CTACGATTAT
TCGAAGCGCA GTCACCTCTC ATCTGACGAT CATATACGGA TAATGTTGGA CATGACTCGA
AAAGGTATCG CTAACTTTAC GATAGCAACA CCGGAACAGA CGTTTGCCTT TGGTGGAACA
AGTAACCTCG ATTCAGCAGA GGGCCGTCTA TTGACTAACT TGACTGACTG GGGGCCTATG
GTCGTTGAGG GCGTCCAATA CGACATTTCC CGAGAGGCCC GTGAGCACAT TTGGAAAGTA
TGCCCTGAAA GTAAGAATTT TTATCCGGGC GTGACACGCA CGGCATGTGT CGGGGACCAT
GTGGATCCGA TTTCCTGTGC CAGAGCATAC AACATCTTGC CCGTCAACTG CAGTAGTGGG
AGCGAAGCGA GCTTGCCTTG A
 
Protein sequence
MSLFLSLAGA SSSVHISKAL LVLIVIQWIV FAKLSKRPTS ATLIERRHGA SGVQTTVFEP 
AKVQAKVTQV DNECKSFAPI SEVMNQESEP EIDGVAFMIL KKRPYWFFKR YNALLDSALA
TVPNTWAIQL FVNQDWFENT LLPNQYGVRR HVLDNPRVIV KDLPLRLQNN KPGPITEDRW
IWDNIVNATT ATTETTDYFP VVHFHGGGSF CANSKMSYAD LRNARIDFIG PPSTTFGGMG
GLGGGYFYQN RYAALAVYDY SKRSHLSSDD HIRIMLDMTR KGIANFTIAT PEQTFAFGGT
SNLDSAEGRL LTNLTDWGPM VVEGVQYDIS REAREHIWKV CPESKNFYPG VTRTACVGDH
VDPISCARAY NILPVNCSSG SEASLP