Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40645 |
Symbol | |
ID | 7198569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 53207 |
End bp | 54367 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184723 |
Protein GI | 219129075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGT TCTTGTCGTT AGCGGGAGCC TCATCATCAG TCCATATATC CAAAGCCCTT CTTGTTCTAA TAGTCATCCA GTGGATTGTG TTTGCAAAAC TAAGCAAGAG ACCCACGAGC GCAACCCTTA TCGAGCGAAG GCACGGTGCA TCTGGCGTTC AAACCACAGT TTTTGAACCA GCGAAAGTAC AAGCAAAAGT TACGCAGGTC GACAACGAGT GCAAAAGTTT TGCACCTATT TCCGAAGTTA TGAACCAAGA AAGCGAGCCA GAGATTGATG GTGTAGCCTT TATGATTCTG AAAAAGAGAC CATATTGGTT TTTCAAGCGC TACAACGCGC TGCTCGACAG TGCTCTTGCG ACAGTCCCGA ACACCTGGGC CATTCAGCTT TTTGTCAATC AAGACTGGTT CGAAAACACG CTATTGCCTA ATCAATACGG CGTCCGGCGT CACGTGCTAG ATAATCCACG AGTGATTGTC AAGGACTTGC CGCTTAGATT GCAAAACAAT AAACCGGGTC CAATCACAGA AGATCGCTGG ATATGGGACA ATATCGTCAA TGCCACAACT GCCACAACCG AGACGACGGA CTACTTCCCT GTTGTTCATT TTCACGGGGG CGGAAGTTTT TGTGCAAATT CCAAAATGTC CTATGCGGAT CTCCGGAATG CTCGAATTGA CTTCATTGGA CCACCTTCGA CAACTTTTGG TGGGATGGGT GGACTGGGAG GAGGCTACTT CTACCAAAAT CGCTATGCCG CACTGGCAGT CTACGATTAT TCGAAGCGCA GTCACCTCTC ATCTGACGAT CATATACGGA TAATGTTGGA CATGACTCGA AAAGGTATCG CTAACTTTAC GATAGCAACA CCGGAACAGA CGTTTGCCTT TGGTGGAACA AGTAACCTCG ATTCAGCAGA GGGCCGTCTA TTGACTAACT TGACTGACTG GGGGCCTATG GTCGTTGAGG GCGTCCAATA CGACATTTCC CGAGAGGCCC GTGAGCACAT TTGGAAAGTA TGCCCTGAAA GTAAGAATTT TTATCCGGGC GTGACACGCA CGGCATGTGT CGGGGACCAT GTGGATCCGA TTTCCTGTGC CAGAGCATAC AACATCTTGC CCGTCAACTG CAGTAGTGGG AGCGAAGCGA GCTTGCCTTG A
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Protein sequence | MSLFLSLAGA SSSVHISKAL LVLIVIQWIV FAKLSKRPTS ATLIERRHGA SGVQTTVFEP AKVQAKVTQV DNECKSFAPI SEVMNQESEP EIDGVAFMIL KKRPYWFFKR YNALLDSALA TVPNTWAIQL FVNQDWFENT LLPNQYGVRR HVLDNPRVIV KDLPLRLQNN KPGPITEDRW IWDNIVNATT ATTETTDYFP VVHFHGGGSF CANSKMSYAD LRNARIDFIG PPSTTFGGMG GLGGGYFYQN RYAALAVYDY SKRSHLSSDD HIRIMLDMTR KGIANFTIAT PEQTFAFGGT SNLDSAEGRL LTNLTDWGPM VVEGVQYDIS REAREHIWKV CPESKNFYPG VTRTACVGDH VDPISCARAY NILPVNCSSG SEASLP
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