| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40644 |
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| Symbol | |
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| ID | 7198568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 49863 |
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| End bp | 52493 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184722 |
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| Protein GI | 219129073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAATG TACCCAAAGT CAAAAGCCCT GCTGGTCGAC GGTTGAGAAT GATCCCGTTC
ACGTGGATTG TCTCCGTAGT GGCTGTGGCA ACGTGCGCGA ATCTCGCATG GATACAGATC
CTGTCGACGC AGACAACCTC TGGATTGCAC GTCCGCTCCG TTACGACAGA ATTTGGAATG
CCAAACTCCC AACCATCGGC CAAGAACCGC TTGTCGCTTC AACGAAAGAC TCCGACAAAG
AACAATGGCA CTACAACACT CCAGAACGAA TTACCAACAT ACGTAAAGAC GCCGGAACAG
CGTCGCCCTT TTTCTACTAC CGTTACTACT ACATTCACAG GGAATGCAAC GACGCGGACT
CCAGAGACTG GAACAACATC ATCCGGAACA CCTCCGCGTT CCAATCATTC TACATCCGTT
CCCCCGCAAC CTGCCTCACA ACACCAAGAC CTTTTACTAC ACAGCACTGC AAGCCTTTTC
CCGCACCCAG CCAAGTCCAT GCTTCTGATA CGCGCTATCG GGAACTCTCT CCCTCCGCGT
CACAGCGCGT CACAGACCTT GGACAATCTG GATTTTCTGC TCGAGCACGA GGAACGTTTT
CCCAACATGA CCCGCCACTG GTTCGTGAAT CGAATCGTTG ACAAGAAGCA AGAGGAACAG
GTACTGGAGC GACTTCGTCG ATCCAACGAA TCGTTTTCGG TCATTCCCTT CGACATTGCC
GAATACAGTG CTCTTCCCTA TCACCATCTA CCAGACGATC TCATCCATTC CGTCCTGTAT
CAGACGACTT TATCGATCGA ACAGAAGCTC ATGCACCACA GGCTTCTCTA CGCAATCAAC
GTCAACGGAG TCCGCAACGC CATGCTGGAC TTCGGTCGGA CTAGGTCAAA GGAAGAGTAC
GTTTTGCCCT GGGACGGCAA CTGTTTTGTC ACCAAACAAG CATGGTCCGC TATGCAAATT
GCGTTCCGAA ACCAAGCGTC CGCCAGGTAT TTTTACACTC CAATGGACCG ACTCTCTCAA
CCCAATGAGG CTCTGCTTTC GGAATCCTAC CAACCCCATC CCAAAGAGGA GCCCCAGATC
ATTTTTCACA AAGACAGCGT GGCTCGGTTC GACCCCACGC TCCGTTACGG AAACCTGAAC
AAGATAGAGC TTTTGGTCCG TTTGCGCGTA CCAGGAAAAC CGGCTGCCTT GTGGGACACG
TATAAGGACA CCGATCAGAA AAAGGCATCG GCAATGCTAC CGCCGACCGA CATGCACAAG
ACAGTTGGAG CATCGCTCGC TGGATGGACC ACTCGCCTCT ACTCTGGAAA TGCTGAGGCT
GAGGCTGTTG GTGGAGTCCG CCGTCGAGTG GCGTCGCGAA ACACTGCCAT TTTGCGGTTG
ATCGAGCGGC TCGATTTGAG GGCAGCTACC GAATTGTACG GATTGTCGTC CTCCAGTGTG
CTCTTCTTCA ACGTGACTAA GTTGCAGATT GAGCGTGATC TGTGGAAAAG GGGAGACCCA
ACACCTCCAA TCCGCAACTT GATCGAGGCA GCGGAAGAAG TTTTACTGTC GCCGGACATG
ATCAGCGTCG ACGCAGTCCC TGAAGACAAT GATGCTAACC CACAGAAAAA CCATTTCCAC
TTTGAGCTTC AATCAATGAT GAATGCTACG ACCATTCTAG CTCTAACAGG ATTTATCACG
GAAAACAGTA CGTATTCGAC CAAAGCAGCT AGCATTCTAC GATCCTGGTT TGTGGAGCAA
CAGACGCGTA TTGCCTGGGA CTTGGATAAA CAATACTCGT CAAACTCAAC ATTCCCCGCA
AAAACAAATT CTTCTGCCAG CGAGAATATT TTCCGTCGTA GCAACGACAT AATGATGATG
GACATGACAA ACTTGGTATA TCTCCTTGAC GCCGTAAAAA TTTTGGAATC GAAGGGTGAC
GTACTTTCTA TTTCGGATAG GCTTGGTTTG CAAGAATGGT TTGGTCACTA CCGTCAGTGG
GTGACAACGA CTTCACACGC CAGGATGGTG TACACGGCTA GCAATCATAT GGGTGTATTT
TACGATGTGC AGATGGCCGC TTTGACTCTG TACTGCAACA AACTACTTGA TACCGTCCGA
ATTATGCATC GATCCATCTC CCGAGTCCAA TTACACGAGA AGACGCTGGC AAACGCTCCG
TTGCAAAATC AGAATGGTAC TAATATGACG GATAGTGAAT CTGAGGGCTG TGATTCAGAT
CTTCTTCTGT TGCAGGGATG GTCTGTAATG AGCAGACTTG CAGGTACAAT TGGAGTAGAC
TATTGGCAGT TACTCCGGAG GGTTAAAGGG AGTACTGACA GTGCACTGTG TTCAGTCATG
TTGAAGAGTA ACCCTTTGTT AGACCCAAGT CGAGAGTTGT GTTTGAAAGA TCATGGCGCA
AACGCCATGG GGCGCGCCGA GTCTATTCGT CGATGGTGGC CCGTGGCTGT TGATGCGGCG
CGAAATTGCA TGTATCATTC CAGTTCACTA CCAAGTTGGG ATATTGATAC AAAGTGGGGG
GTGTCATTGG ACGAACGTTC ACCGACGAGC ATGTACGAGA CACCGGTGTT CTTCGCGTTA
CTCGGTGAAG CCTCTCAGAA GAAGCTGCAA TTAGTCGAAC AAGTTGGCTA G
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| Protein sequence | MVNVPKVKSP AGRRLRMIPF TWIVSVVAVA TCANLAWIQI LSTQTTSGLH VRSVTTEFGM
PNSQPSAKNR LSLQRKTPTK NNGTTTLQNE LPTYVKTPEQ RRPFSTTVTT TFTGNATTRT
PETGTTSSGT PPRSNHSTSV PPQPASQHQD LLLHSTASLF PHPAKSMLLI RAIGNSLPPR
HSASQTLDNL DFLLEHEERF PNMTRHWFVN RIVDKKQEEQ VLERLRRSNE SFSVIPFDIA
EYSALPYHHL PDDLIHSVLY QTTLSIEQKL MHHRLLYAIN VNGVRNAMLD FGRTRSKEEY
VLPWDGNCFV TKQAWSAMQI AFRNQASARY FYTPMDRLSQ PNEALLSESY QPHPKEEPQI
IFHKDSVARF DPTLRYGNLN KIELLVRLRV PGKPAALWDT YKDTDQKKAS AMLPPTDMHK
TVGASLAGWT TRLYSGNAEA EAVGGVRRRV ASRNTAILRL IERLDLRAAT ELYGLSSSSV
LFFNVTKLQI ERDLWKRGDP TPPIRNLIEA AEEVLLSPDM ISVDAVPEDN DANPQKNHFH
FELQSMMNAT TILALTGFIT ENSTYSTKAA SILRSWFVEQ QTRIAWDLDK QYSSNSTFPA
KTNSSASENI FRRSNDIMMM DMTNLVYLLD AVKILESKGD VLSISDRLGL QEWFGHYRQW
VTTTSHARMV YTASNHMGVF YDVQMAALTL YCNKLLDTVR IMHRSISRVQ LHEKTLANAP
LQNQNGTNMT DSESEGCDSD LLLLQGWSVM SRLAGTIGVD YWQLLRRVKG STDSALCSVM
LKSNPLLDPS RELCLKDHGA NAMGRAESIR RWWPVAVDAA RNCMYHSSSL PSWDIDTKWG
VSLDERSPTS MYETPVFFAL LGEASQKKLQ LVEQVG
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