Gene PHATRDRAFT_23646 details

Gene Information

• Locus tag: PHATRDRAFT_23646
• ID: 7198557
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 470402
• End bp: 472508
• Gene Length: 2107 bp
• Protein Length: 648 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184808
• Protein GI: 219129252

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAACAGGAAG AGCGAGATAT GGGGACGGAG ATCACGTTTG TTGATTTCCG CAATACGCTT 
TTGCACACGG GCATGGTGGA AAAATTGGAA GTCATCAATA AGAAAATGGC CCGCGTTGTC 
CTTAAACCCA ACGCAAAGGT GTCCAATGTC GTTGGTGTGA ACGAACCGGG CTTGCACAAT 
AATAGCATTT CCTCGGAGAA CTGGTCTTCG TCTGCCAACG ATAACACCCA AATGGCGTTT 
GAGACAACTG CGGGATCTTC GAATACCACA AATGGACTCA CGGCCTCTCC CAACTCCAAC 
GGAAAGAAAG AAAAGTCCTT CTACTTTTTC ATTGGCAGCG TCGAATCTCT AGAAGAAAAA 
CTGACCAAGG CTCAGGCCCA TGTTCATCCC GAAGACTGGG TTGAAGTTCA ATACATGTCC 
CGGACCAATT GGACGTTGGA GTTGCTCAAA TCACTTCCGA TGGTGGCCTT TGTAGCTGCA 
GTGTATTTTG GATCCCGTGG TTTGTCTGGA ATACCAGGAG CCGGCGCTGC CGGTCGGGGA 
GGAGGGGCTG GTGGGATATT TTCCATCGGC AAATCGACCG CCAAAAAAAT CACCAAAGAA 
GACGTCAGTG TGACTTTTGC AGATGTGGCA GGATGCCAAC AGGCAAAAAT GGAAATCATG 
GAATTTGTGG ATTTCTTACA AAACTCGGAG CGCTTCACAA AACTGGGCGC CAAAATCCCA 
AAGGGCGCGC TGCTGTGTGG GCCTCCTGGA ACCGGAAAGA CGCTGTTGGC GAAAGCAGTC 
GCCGGCGAAT CGGGTGTGCC CTTCTACAGT ATATCCGGTT CCGACTTTAT TGAAATGTTT 
GTTGGTGTTG GACCGTCACG TGTCCGTGAT CTGTTTAAAG AAGCCAGAGC AAATGCTCCC 
TGTATTGTCT TTATCGATGA AATAGACGCC GTCGGTCGCC AACGTGGACG TGGCGGTTTT 
TCCGGTGGTA ACGATGAACG AGAAAACACA TTGAATCAGC TACTGGTAGA AATGGACGGG 
TTTTCGCCGA CAACCGGGGT GGTCGTTCTG GCTGGTACCA ACCGAGCCGA CATTCTTGAT 
CAGGCATTGA CTCGTCCCGG ACGCTTTGAT CGACAAATAA CCGTTGATCG ACCCGATTTG 
CAAGGGCGCA AAGAAATTTT TGAGGTTCAT TTGCGGGGCA TCAAATTGGA AGGTGAGGTA 
AAAGAATACG CGGGTAGACT AGCTGGGTTG ACGCCCGGGT TCGCTGGTGC CGATATAGCC 
AATATATGTA ACGAAGCGGC GATTGTTGCA GCGCGTCGCA AGGCCGAGTC CGTCACAATT 
GTGGATTTTG AAACGGCAAC AGATCGTATT ATTGGCGGCT TGGAAAGCAA CAAAATCATG 
AGCACGGAAG AGCGCAGTAT CGTAGCGCAC CACGAAGCTG GACACGCTGT TGCTGGATGG 
TTCCTGGAAC ATGCCGATCC ATTGCTAAAG GTTACAATTA TCCCTCGAAC GAGCGGTGCT 
CTTGGATTTG CTCAATACTT GCCAAGAGAA GTATTTTTGC GCAGCCAAGA GCAAATAATG 
GACCTCGTTT GTATGGCATT AGCTGGACGA GCGGCTGAGG AGGTATTTTT TGGACGCGTG 
ACAACGGGTG CTTCCGATGA CTTACGACGG GTGACGCAGT TGGTCTACAG CACAATCAAG 
GACTACGGAA TGAATAGTCG AGTCGGTCAA CTTTCTTTCC CGAGAGACGA TAATGCCGGG 
CCGGGTGAAA AGCGATACTC CGACTCGACG GCCGAAGCAA TGGACGACGA AGCCCGCGCC 
ATTGTAGACG AGGCCTACCA GCGGACTGTA GACTTGATGA CGGAGAAGAA AGCACAAGTT 
GAGATGGTGG CCAACTTACT TTTGGAAAAG GAAACGATTA CGCACGACGA TTTGGTCGAT 
CTAATTGGGG CCCGTCCGTT TCAGGGTGAC AGCGCGTACC AGGAATACGT AAGCGGTCGA 
GGGCCGATGA AAAAGAAAGA GCCCCAAGAA GAAATTGATA ATACTGAGCT GGATGGTGTT 
CTTACACCAG GCCTCGCATA AGAAAATAGT CTACGCGTTT TCGTTTATAA ATCAATGTAC 
GTCTTTC 

 

Protein sequence

MGTEITFVDF RNTLLHTGMV EKLEVINKKM ARVVLKPNAK VSNTTAGSSN TTNGLTASPN 
SNGKKEKSFY FFIGSVESLE EKLTKAQAHV HPEDWVEVQY MSRTNWTLEL LKSLPMVAFV 
AAVYFGSRGL SGIPGAGAAG RGGGAGGIFS IGKSTAKKIT KEDVSVTFAD VAGCQQAKME 
IMEFVDFLQN SERFTKLGAK IPKGALLCGP PGTGKTLLAK AVAGESGVPF YSISGSDFIE 
MFVGVGPSRV RDLFKEARAN APCIVFIDEI DAVGRQRGRG GFSGGNDERE NTLNQLLVEM 
DGFSPTTGVV VLAGTNRADI LDQALTRPGR FDRQITVDRP DLQGRKEIFE VHLRGIKLEG 
EVKEYAGRLA GLTPGFAGAD IANICNEAAI VAARRKAESV TIVDFETATD RIIGGLESNK 
IMSTEERSIV AHHEAGHAVA GWFLEHADPL LKVTIIPRTS GALGFAQYLP REVFLRSQEQ 
IMDLVCMALA GRAAEEVFFG RVTTGASDDL RRVTQLVYST IKDYGMNSRV GQLSFPRDDN 
AGPGEKRYSD STAEAMDDEA RAIVDEAYQR TVDLMTEKKA QVEMVANLLL EKETITHDDL 
VDLIGARPFQ GDSAYQEYVS GRGPMKKKEP QEEIDNTELD GVLTPGLA