| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23552 |
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| Symbol | |
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| ID | 7198495 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 106162 |
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| End bp | 109967 |
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| Gene Length | 3806 bp |
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| Protein Length | 1060 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184735 |
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| Protein GI | 219129100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTGTTGCG CCCACGGTAT TTAGGTGTTC AACATTCCTT TCTGTTAGGT CAACCAAGGT
TGTTGGTGTT GGAATTCCGG TAAGGTATTT GCTCTCCGGG CAAAGACGAT AACACCCAGT
CGCAGTCAGA GAAGTGGAGG TGAGAGCACG CGTATCGGAA AGGATAGCGT CGTCACCGAG
TGTTGGAATC GTGACCCTTG GACGGTGTCA ACGCAAGATC TCTCCCAATA TCTTGCTCAG
GAACCATTCG AAACATCCTC GTCCTAGCGT GTCTCTGGTA GCTAATAGCC CAACGAACGA
TACTCCCCGT ATAAAAGTTC ACAAATCTGA CTGTCGACAC CAGTAAATTA CGTCTACAAA
GATTTTTTTG TCGTCATCAC TCACCATCGT TGCTCCGTTC CTCGCAGATG ACGTCTCGCC
TGTTGCGTGC CGTCACGCTG TCGCCGCCGA CTTGGCAACG TTCGTACCGC GTAGTTCGGC
ACTTTACGTC CAGCTCCGTG TATGGGCAAA AGTCGAGTAC TCCGGTCGAT GATACCCCAC
CGCTCGGCGT TGCCTACAAT TCCTTGACGG TCGGTATTCC CAAGGAAACC TACGCCTTGG
AAAAGCGCGT CGCGGCGACC CCGGAATCCG TGGCTCGTCT CGTTGCACCC GGATTTTCTG
TCGTTGTCGA GGAAGGAGCC GGCCGGAACT CCTTTTTTTC CAACGCGGAC TACGAAGCCG
CCGGGGCTAA AATTGTACCC AATATTTGGA CCGAATCCGA TATCGTTCTC AAGGTACGCC
GAACGAATCG TGCCACTCGA CTCACCACAA CGCAACCCCG ATGGTGGACT CTGCAGTAGG
ACGGGCAGCA ATACTCAGAC CTACTCTATT ATTTTTGCAG CTCCGCCCAC CTACTCCCGA
AGAAGCCACT CTGCTGGGCA ACAAGACCTT GATCAGCTTT GTGTATCCCA AACAGAATGA
GGCCCTCGTC AATCAGTTGG CCTCGCAACA GGCCACCGTC TTGGCCATGG ACTGCATTCC
TCGTACGCTT TCTCGTGGAC AAACTTACGA CGCTCTGTCG TCGCAAGCCA ATATTTCTGG
TTACCGGGCC GTCCTGGAAG CGTCCAACGA ATTTGGCCGT TTCTTTGCCG GTCAAATGAC
GGCTGCGGGC AAAGTCCCAC CCGCCAAAGT CCTCGTGATT GGTACGGGTG TGGCTGGCCT
CGCCGCTATC CAAACGGCTA AAAACATGGG AGCCGTCGTC CGAGCCTTTG ATGTCCGACC
CGTAACCAAG GAACAAGTTG AGGCCATGGG AGCGCAGTTT CTGGAAGTCG ATTACTCCGA
AGACGGCAGT GCCGCCGGAG GCTACGCCAA GGAAATGTCC AAGGAGTGGC ACGCCGCGGC
CCGCGCCATG CTCACTAAAC AATGCGCCGA CGTGGACATT GTCATTACCA CGGCCCTCAT
CCCCGGGCGA CAAGCTCCGA TCATGGTTAC CAAGGAAATG GTGGCTCAGA TGAAGAACGG
ATCGGTCACA GTAGATTTGG CCGCCGAAGC CGGGGGCAAC GTAGAAACGA CCGTGAAGGA
CAAAAAGTTT GTGACGGAAA ATGGAGTCAC TTGCCTGGGT TACACTGACT TGCCGTCACG
CTTGCCTACT ACTTCGAGCT CGTTGTATTC TAATAATATC TCCAAGCTAC TGCTCTCCGC
TGGTCCGCAA ACTACCAAAA AACCGGGATT CTTTTACCTG GATCACAACG ATGATGCTGT
ACGCGGCATG CTGGTCCTCG AAAAGGGCAA GATGATGTAC CCAGCTCCCT TGCCGCCGGC
TCCTGCTGCC CCCGCTAAGG AGAAAAAGGA CGCGGCCCCG GTAGTAATCG ACTACAAGGC
TCCTTTCCTG CAAGGAGCCA AGACAGCGGG AATATTATCC ACTTCCATTC TGGCCTTTGG
TGCAGTTGCA CCGAATCCGG CCTTTTCTAG TATGTTCACG ACGTTCGCCC TTTCCAACGT
GATTGGCGTG CAAGTGGTAA TGGGCGTAAC CCACTCATTA CACAGTCCGC TAATGGCCGT
CACGAATGCT ATTTCAGGTA CAACCGCCCT GGGTGGTATG CACTTGTACG CACACTCAAC
GAGTGTCGCT GCGACCTTGC TGGGGGCCGC CGCCACGACC TTGTCGACCG TCAATATTGT
CGGTGGCTTT ATCGTCACAA CGAAAATGTT GGACATGTTT AAGCGACCCG ACGATCCTCC
GGAGTACTAC CATTTGTACG GGATTCCAGC TGCGACAACG ATGGGTCTCT ACGGAATCGG
TACAATGACG GGAAAATTCC CCGAGCTCGA CGCATCGGCC GCGACGTTGT CGGGACTCTT
ATGTATTGGG GGTATTGCTG GATTGGCGTC TCAGAAAACC GCTCGCTTGG GTGCCGTATC
GGGCCAATCT GGTGTCGCCC TGGGTGTCGC ATCGACTATG GGCCACCTGA ATCCTACGAT
TGGTACGGCG GCAGGTATTA CTGCGCTCAT GGGCGTGGGG GCTGTGGCGG GTAAATACAT
TGGTGACCGT GTGGAACCAA CCTCTTTGCC ACAAACGGTT GCCGCCTTTC ATTCTCTTGT
GGGCCTCGCG GCCAGTGCGG CAGCAGTGGG TGACTACTGG AACTGCCCGG ATACAACGCA
GCTGGACGGT GTGCATTTGG CGAGCATCTA CTTGGCGACT GTGATTGGTT CGGTGACCGC
CACCGGATCT TTGGTGGCCT TTGGTAAGTT GGACGGCCGT CTGGGTTCGG CTCCCCTGAA
GTTGGCACAA CGTGACAAGA TCAATGCCGG CTTGGGTGCG GCTACATTGG GTGCAGGTGC
TGTCGTCATG GGTGCGCCGG AAGTTGGAAC CGGAATGGCC GCTTTGAGTA GTGCCCTGAC
GACCTCGGGA GTGCTTGGAT GGCATATGAC TGCCAGCATC GGAGGTGCCG ATATGCCCGT
GGTTATCACT GTACTGAACT CGTACTCGGG ATGGGCGCTA TGCGCCGAAG GATTTATGTT
GGATATGCCT ATTTTGACTA CGGTGGGAGC CCTGATTGGA TGCTCCGGTG CGGCACTCAC
CAAGGTAAGT TCCTTTTTTG TTGGTAAGGT TTCTAGGGTC TATGTGGCAG CGTCCCTTTG
TCTCACTGAT TCGTTCTCGT AGATTATGTG CGACGCAATG AACCGTGATA TTTTGAGTGT
CATTTTGGGT GGATACGGAA CCAAGGCCAC CGCTGGAGGA GAAGCCATGC ACTTTGAAGG
TGAAGCCACG ATGACCAACG TGGACGACAC CGTCCGCCTT TTGACCGAGT CTGAGAAGAT
TATCGTTGTC CCCGGGTACG GTTTGGCCGT GGCACACGCG CAGTACCCGC TTAAGGAAAT
GGTGGACGTG TTGATCAAGG CCGGCAAGAA AGTTCGATTT GCGATCCATC CTGTTGCTGG
ACGAATGCCT GGGCAACTCA ACGTTTTGCT TGCCGAAGCT GGTGTTCCGT ACGACATCGT
AGAAGAAATG GAAGAAATCA ACGACGACTT CAAGGATACT GACGTGACTC TGGTTATTGG
AGCCAACGAT ACCGTAAACT CAGCTGCCGA AGATGACCCC AATTCTCAGA TTGCGGGAAT
GCCGGTATTA CGCGTGTGGA ATTCGAATCA AGTGATTGTC ATGAAGCGCA GCCTTGCCGC
TGGTTATGCC GGTGTGGACA ACCCGGTCTT CATCAAAGAC AACACGGACA TGCTTTTGGG
TGACGCCAAG GACACGGTAG AAAAGTTGGC AGTCGGTGTG AAGACGTTCT ATGGAAAGTA
AACGTAAACA TCGCTATCTA TTGCCG
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| Protein sequence | MTSRLLRAVT LSPPTWQRSY RVVRHFTSSS VYGQKSSTPV DDTPPLGVAY NSLTVGIPKE
TYALEKRVAA TPESVARLVA PGFSVVVEEG AGRNSFFSNA DYEAAGAKIV PNIWTESDIV
LKVRRTNQAT LLGNKTLISF VYPKQNEALV NQLASQQATV LAMDCIPRTL SRGQTYDALS
SQANISGYRA VLEASNEFGR FFAGQMTAAG KVPPAKVLVI GTGVAGLAAI QTAKNMGAVV
RAFDVRPVTK EQVEAMGAQF LEVDYSEDGS AAGGYAKEMS KEWHAAARAM LTKQCADVDI
VITTALIPGR QAPIMVTKEM VAQMKNGSVT VDLAAEAGGN VETTVKDKKF VTENGVTCLG
YTDLPSRLPT TSSSLYSNNI SKLLLSAGPQ TTKKPGFFYL DHNDDAVRGM LVLEKGKMMY
PAPLPPAPAA PAKEKKDAAP VVIDYKAPFL QGAKTAGILS TSILAFGAVA PNPAFSSMFT
TFALSNVIGV QVVMGVTHSL HSPLMAVTNA ISGTTALGGM HLYAHSTSVA ATLLGAAATT
LSTVNIVGGF IVTTKMLDMF KRPDDPPEYY HLYGIPAATT MGLYGIGTMT GKFPELDASA
ATLSGLLCIG GIAGLASQKT ARLGAVSGQS GVALGVASTM GHLNPTIGTA AGITALMGVG
AVAGKYIGDR VEPTSLPQTV AAFHSLVGLA ASAAAVGDYW NCPDTTQLDG VHLASIYLAT
VIGSVTATGS LVAFGKLDGR LGSAPLKLAQ RDKINAGLGA ATLGAGAVVM GAPEVGTGMA
ALSSALTTSG VLGWHMTASI GGADMPVVIT VLNSYSGWAL CAEGFMLDMP ILTTVGALIG
CSGAALTKIM CDAMNRDILS VILGGYGTKA TAGGEAMHFE GEATMTNVDD TVRLLTESEK
IIVVPGYGLA VAHAQYPLKE MVDVLIKAGK KVRFAIHPVA GRMPGQLNVL LAEAGVPYDI
VEEMEEINDD FKDTDVTLVI GANDTVNSAA EDDPNSQIAG MPVLRVWNSN QVIVMKRSLA
AGYAGVDNPV FIKDNTDMLL GDAKDTVEKL AVGVKTFYGK
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