| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_16357 |
|---|
| Symbol | |
|---|
| ID | 7198513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011693 |
|---|
| Strand | - |
|---|
| Start bp | 180415 |
|---|
| End bp | 181218 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184749 |
|---|
| Protein GI | 219129129 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCGCAAGTTA TTTGTTGCAC TTGTATTGGA TCCGGTGGCG ATATTCTGGA CGCCATGACG
TTTGATCGGG TGCTTTTGGA CGAAGCCACG CAAGCGACCG AGCCTGCGGT ACTGGTGCCG
CTTATGCGTG GCTGCCGTCA GTTGGTCCTG GTGGGAGATC ACTGCCAATT ACCACCGACG
GTTCTCAGTA CACGGGCCGA GGAGGAAGGT CACGGTGTTC CTTTATTTTC CCGGATGGTA
GCCTGTGGTG TTCCGCCTTA TATGTTGGAT ACGCAATATC GTATGCATCC GTGTATTGCC
ATGTTCCCGT CGGATCTCTT CTACGGAGGT CTTTTGCGGA ACGGTGTCTC AGCACCGGAA
CGTCGGCCGC TGGCGGGTTT CCCCTGGCCT CGTGAAGAAT TTCCCGTCGC GTTCTTGCCA
ATTCAGGGAG TCGAAATGGA CGACGGCGTC AGTAAATATA ACGATGCGGA AGCGGCTGCG
GCTTGCAACG CCGTATCGTT ACTTTTGCAG GGTGGTCAGT GCAGTGCATC GGATATTGCT
GTCGTTACTC CATACGCGGC ACAGGCGCGG TTAATTCGGC GTATGATCCG GCGAATCTTA
CCCGATAGCG GACCCCCCTT TATTGAAGTC GCTTCGGTTG ACGGTTTCCA AGGTCGAGAA
AAAGAAGCGG TAGTCTTCTC TGCGGTTCGT AGTAACGATT ATGGCAGTAT TGGTTTCACA
TCTGATTGGA GGCGTGTAAA CGTTTCCTTC ACCCGTGCCC GTCGTGCTTT GATTGTGATT
GGAAACGAGC ATACGTTGCG CCGC
|
|---|
| Protein sequence | AQVICCTCIG SGGDILDAMT FDRVLLDEAT QATEPAVLVP LMRGCRQLVL VGDHCQLPPT
VLSTRAEEEG HGVPLFSRMV ACGVPPYMLD TQYRMHPCIA MFPSDLFYGG LLRNGVSAPE
RRPLAGFPWP REEFPVAFLP IQGVEMDDGV SKYNDAEAAA ACNAVSLLLQ GGQCSASDIA
VVTPYAAQAR LIRRMIRRIL PDSGPPFIEV ASVDGFQGRE KEAVVFSAVR SNDYGSIGFT
SDWRRVNVSF TRARRALIVI GNEHTLRR
|
|---|
| |