Gene PHATRDRAFT_16286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16286 
Symbol 
ID7198558 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp476260 
End bp477303 
Gene Length1044 bp 
Protein Length284 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184712 
Protein GI219129052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATGCG GAGGATTGGC CGGAATGATT GCCAAGGTGT GTCTGCGCTT TCCTGTCGAA 
TGTTTTCTGA ATACATGCCA AATGTATGAA TGTGATTTTT ACGTCTCCTT CGAATTGTTT
TCACTGCATC GAAATTGTTA AGTTTAGCCT GCACGCGTGA ACCCTTCCAA AACCATCCAC
CTATACTCAG GCACAACTTC TTGCTCCTTT GAATCATACT CTTAGACGGC TACAAATCCG
CTGGAACGGA TCAAAATGCT GTCGCAAACA GGAGAACACA GCGGATCCAA CACAGTTGTT
GGCCTTTATC GAGACATCCT TCGTAACGAA GGGGTTGTGG GCTTATGGGC GGGCAACGGT
GCCAACTTGC TCCGCGTGTT TCCAGCCAAG GCCATTGTCT TCAGTAGCAA TGATATATAC
AAAAAGACAT TGCGAACGAC CTCTCAAACA CCTTCCGATC AAGCACTGTC AACGCCTCTT
TCATTTTTGG CCGGGGGCTT GTCGGGAATG ACGGCGAGTG CCTTAACCTA CCCCTTGGAT
TTTGCCCGCG GAAGGATCTC AGGAAAGCTG GGAGCTGCTG GCAAGAAAGC CTACGGGGGA
ATTTTAGAAA CAGTCCGTCT GACGGTAAAG GACGAAGGAT TCTTGGCGCT TTATAAGGGC
GTCACACCGA CACTGATGGG TGCAATGCCC TACGAAGGTA TCAAGTTTGG AACTGTGGGG
GTTTTGGAAT CCATTTTTCC TCACGAGGGC GACACGCCGC AACCTCTCAA GAAAATGCTA
TACGGTGGTC TCGGCGGAAT CATGGCGGGT CTCATTACGT ATCCCAATGA TACCATTCGG
CGATTGCTTC AGCTACAAGG TAGCCGAGGA ACCTCTGTAC AATATGCAGG GTATTGGGAT
TGTGTGCGAC AAACTTACCA AAAAGAAGGC ATCCGTCGTT TTTATCGAGG TCTGACAATC
AATTTGATAC GAATGGCTCC CAATGCTGCT GTACAGTTTG GCTCTTATGA ATTTCTCAAG
CAATGGTCGG CCAAATGGTT CTGA
 
Protein sequence
MICGGLAGMI AKTATNPLER IKMLSQTGEH SGSNTVVGLY RDILRNEGVV GLWAGNGANL 
LRVFPAKAIV FSSNDIYKKT LRTTSQTPSD QALSTPLSFL AGGLSGMTAS ALTYPLDFAR
GRISGKLGAA GKKAYGGILE TVRLTVKDEG FLALYKGVTP TLMGAMPYEG IKFGTVGVLE
SIFPHEGDTP QPLKKMLYGG LGGIMAGLIT YPNDTIRRLL QLQGSRGTSV QYAGYWDCVR
QTYQKEGIRR FYRGLTINLI RMAPNAAVQF GSYEFLKQWS AKWF