| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49755 |
|---|
| Symbol | |
|---|
| ID | 7198342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | + |
|---|
| Start bp | 173995 |
|---|
| End bp | 175161 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184501 |
|---|
| Protein GI | 219128609 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAGGTCATCG GAGACGTAGA ATGACAATTG ATGATGAGGA GACTGACAAA TCATCCACCC
AGAGTCCTAA GAAGGCGCTC CAGGTATTCA TTCGACGACC ACACAAGAAA GGCGTGCACA
AGTTGGAACA CAAACGTTCC AGCTCGCCTT CAGTAGCTTC CCGTAAGCGC TCGGGACAAT
TGGTGATCAG CAGCAACCAC GGCTTACCTT CCATTGGTCG GAAAGTTTCA GAAATACGGA
AACCTGTACT GACATCGGTG CACAGATCCG AGATCGATAC CAACGATTTG TTCCGAGAGA
ACGACGATTC CGTCTTCCCG GATGTTGCCT GCGTGTCCGA TACTCTCTTG GCAATTCAGA
GCCTAAAGAA CGGCAGTAGA TCCCAAACGA TTGCGATACC TCTTACGCAA GCGCCTGGAA
GACAAGCACA GCAACGAGCA CCGCATTATA TACACGGAAT TCTCGAATGC CAGCTCTATA
TTCTGATAAA GGATGCGAAC AACCATTTCC CATCAGTCGG AGGTACAGTA CCGTCTTTGC
AAGTTAGTAC AGAATTGCCG CAACTACTAC GGGCGAATAA ATTGCGGAGA CTTTCCTCCA
CTACGCAATC CTCCCATCCG CTGACCATCT TGCTGGAAAC GAACGATTAC GTTCGCGCCG
TGTGGGATGC GCACCACCGG TACCCGGGTA ATGCCGCTGC CACCGAATGG TTTCTCAGCA
TTCTCCCCAA ATGTACCGGG CTCTGCATTC CAATAATACA GCTAGAAGAA CTGTACCGTA
ACAGTTCCGT GGAATGCAGC GAGCCCCTGG AGTCCATTCT TAAGCAATTG CAGCAGATGC
AAGTGCTCAT GGCGTCGCAT TCGTCCGGCG TTTTTCAATT GTGGCTGCCA TCTTGGGGTC
TCGTTTTGAA CGCTTGGGAG GCAGCCCGCA GAAAACTGCT TTTGCAGCTC AAGCAGAGCT
CGTTCCAGGA ACGTTCCGTA CAAGCTTTGC AACAAGAGTA TAGCCCAATC GACACGAAGC
TTCTGATTGA CTGGATGGTC GACCAGGGCG AAGTGCAATT CCGAAAACGA CCCGCAGGCG
TCTTTGTCAA ACTCCTGGCT TCTGATGAGT CTTGGTCGAC AAGATAATTC AGAGAGACCA
ACAACTAAAT TTACGTGTTA TGTTAGC
|
|---|
| Protein sequence | MTIDDEETDK SSTQSPKKAL QVFIRRPHKK GVHKLEHKRS SSPSVASRKR SGQLVISSNH
GLPSIGRKVS EIRKPVLTSV HRSEIDTNDL FRENDDSVFP DVACVSDTLL AIQSLKNGSR
SQTIAIPLTQ APGRQAQQRA PHYIHGILEC QLYILIKDAN NHFPSVGGTV PSLQVSTELP
QLLRANKLRR LSSTTQSSHP LTILLETNDY VRAVWDAHHR YPGNAAATEW FLSILPKCTG
LCIPIIQLEE LYRNSSVECS EPLESILKQL QQMQVLMASH SSGVFQLWLP SWGLVLNAWE
AARRKLLLQL KQSSFQERSV QALQQEYSPI DTKLLIDWMV DQGEVQFRKR PAGVFVKLLA
SDESWSTR
|
|---|
| |