Gene PHATRDRAFT_49747 details

Gene Information

• Locus tag: PHATRDRAFT_49747
• ID: 7198336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 142733
• End bp: 143503
• Gene Length: 771 bp
• Protein Length: 185 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184495
• Protein GI: 219128597

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCAG AGGGAGTACG TCTTTCCAAA CGTAGCCTTG CTTCGCTGGC GTTGGGCCTG 
GCATCGATGA GCGTGATGGT TCTATCAACC GAGTCTTGGA GCCCTCCCTT GTTTCCTTCG 
TGTATGCGAC CACAGACTAT GGCAATGAGT GCGACGAAAA CATCGACTAA AGAAACTAGT 
TTTGACGGAT CCTTCGGCAA CCGCCGCCGG TTCGTAGCGG CGTTTGTAGG TGGCAGCTTG 
CTGTGGCGAA CGGCTTCCTT TCCGTGCACG GCGTCGGAAG CAACCGCCAA CGATGCGACG 
ACAAATGCGG TAGATCCCTG GGATAAATTC GGTCAAAGCT TGCAACAACA ACAACAACAG 
CAGCCAATGC CACAGAGTGT TTCAACGCCG AAATGGCCCG AGACTTCCGC GTCACCCTTG 
CCACGTACGA TGGATTCAAT TCCGTCGTCG TCGTCTGCTA GCGAGTACGG CAGCAATTCT 
TCCAACGGGA ACGACTTGGA ACGAGCGATT CAGGAATCCA AGAAGAGACG ACAGGTGGAC 
CCGAGAACGC ATGGTTGAGT AGACGCCAAG GTCGGTATGT AAATAGGAAA GGTCACTGTA 
CGGTGCATAA TGACTAGGAG AATCTGTAGA TCAGGATGTT AATGCGGGGG CGAAATGCAG 
ACAGGTCTAA ACAGACTTAT TGCACAACAA TTTTAACAGT GAAAGCCCCT TTGAAGCACC 
AATGGGCACG CATTGCATTT TTACGGTTGA TTATAATCCT TTCAACCCTT C 

 

Protein sequence

MKSEGVRLSK RSLASLALGL ASMSVMVLST ESWSPPLFPS CMRPQTMAMS ATKTSTKETS 
FDGSFGNRRR FVAAFVGGSL LWRTASFPCT ASEATANDAT TNAVDPWDKF GQSLQQQQQQ 
QPMPQSVSTP KWPETSASPL PRTMDSIPSS SSASEYGSNS SNGNDLERAI QESKKRRQVD 
PRTHG